Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCCBP05166 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCCBP05166 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCCBP05166 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCCBP05166 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCCBP05166 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.83■□□□□ 0.28
PCCBP05166 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCCBP05166 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.83■□□□□ 0.28
PCCBP05166 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.83■□□□□ 0.28
PCCBP05166 FRMD8P1-201ENST00000440433 1524 ntBASIC16.83■□□□□ 0.28
PCCBP05166 CEND1P1-201ENST00000451006 455 ntBASIC16.83■□□□□ 0.28
PCCBP05166 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PCCBP05166 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.83■□□□□ 0.28
PCCBP05166 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.83■□□□□ 0.28
PCCBP05166 AL596442.2-201ENST00000610240 980 ntBASIC16.83■□□□□ 0.28
PCCBP05166 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.83■□□□□ 0.28
PCCBP05166 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.83■□□□□ 0.28
PCCBP05166 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCCBP05166 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCCBP05166 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCCBP05166 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCCBP05166 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.83■□□□□ 0.28
PCCBP05166 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCCBP05166 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCCBP05166 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCCBP05166 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCCBP05166 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCCBP05166 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.82■□□□□ 0.28
PCCBP05166 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
PCCBP05166 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCCBP05166 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCCBP05166 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCCBP05166 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PCCBP05166 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCCBP05166 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCCBP05166 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PCCBP05166 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCCBP05166 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCCBP05166 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
PCCBP05166 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCCBP05166 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCCBP05166 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.82■□□□□ 0.28
PCCBP05166 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCCBP05166 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.82■□□□□ 0.28
PCCBP05166 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCCBP05166 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.82■□□□□ 0.28
PCCBP05166 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCCBP05166 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCCBP05166 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.82■□□□□ 0.28
PCCBP05166 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.82■□□□□ 0.28
PCCBP05166 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCCBP05166 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCCBP05166 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCCBP05166 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PCCBP05166 AC005332.8-201ENST00000622750 2735 ntBASIC16.82■□□□□ 0.28
PCCBP05166 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCCBP05166 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCCBP05166 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCCBP05166 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCCBP05166 LINC02012-201ENST00000608206 1725 ntBASIC16.82■□□□□ 0.28
PCCBP05166 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.81■□□□□ 0.28
PCCBP05166 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.81■□□□□ 0.28
PCCBP05166 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.81■□□□□ 0.28
PCCBP05166 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PCCBP05166 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.81■□□□□ 0.28
PCCBP05166 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PCCBP05166 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.81■□□□□ 0.28
PCCBP05166 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.81■□□□□ 0.28
PCCBP05166 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.81■□□□□ 0.28
PCCBP05166 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.81■□□□□ 0.28
PCCBP05166 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.81■□□□□ 0.28
PCCBP05166 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.81■□□□□ 0.28
PCCBP05166 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.81■□□□□ 0.28
PCCBP05166 MKNK2P1-201ENST00000437526 628 ntBASIC16.81■□□□□ 0.28
PCCBP05166 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.81■□□□□ 0.28
PCCBP05166 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.81■□□□□ 0.28
PCCBP05166 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.81■□□□□ 0.28
PCCBP05166 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.81■□□□□ 0.28
PCCBP05166 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.81■□□□□ 0.28
PCCBP05166 AC005412.3-201ENST00000580309 715 ntBASIC16.81■□□□□ 0.28
PCCBP05166 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.81■□□□□ 0.28
PCCBP05166 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.81■□□□□ 0.28
PCCBP05166 AC079781.4-201ENST00000641908 219 ntBASIC16.81■□□□□ 0.28
PCCBP05166 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.81■□□□□ 0.28
PCCBP05166 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCCBP05166 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms