Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC073912.3-201ENST00000624414 853 ntBASIC15.47■□□□□ 0.07
HMGN1P05114 AC133561.5-201ENST00000635547 218 ntBASIC15.47■□□□□ 0.07
HMGN1P05114 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.47■□□□□ 0.07
HMGN1P05114 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGN1P05114 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGN1P05114 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGN1P05114 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGN1P05114 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGN1P05114 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGN1P05114 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGN1P05114 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
HMGN1P05114 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
HMGN1P05114 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGN1P05114 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HMGN1P05114 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.47■□□□□ 0.07
HMGN1P05114 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGN1P05114 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGN1P05114 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGN1P05114 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.47■□□□□ 0.07
HMGN1P05114 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGN1P05114 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGN1P05114 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
HMGN1P05114 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 PCDHB17P-201ENST00000539533 2393 ntBASIC15.46■□□□□ 0.07
HMGN1P05114 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGN1P05114 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 KLF4P1-201ENST00000412782 1185 ntBASIC15.46■□□□□ 0.07
HMGN1P05114 TSPY22P-201ENST00000427496 604 ntBASIC15.46■□□□□ 0.07
HMGN1P05114 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.46■□□□□ 0.07
HMGN1P05114 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.46■□□□□ 0.07
HMGN1P05114 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGN1P05114 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.46■□□□□ 0.07
HMGN1P05114 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGN1P05114 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
HMGN1P05114 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.46■□□□□ 0.07
HMGN1P05114 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.46■□□□□ 0.07
HMGN1P05114 AC097493.4-201ENST00000641197 219 ntBASIC15.46■□□□□ 0.07
HMGN1P05114 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.46■□□□□ 0.07
HMGN1P05114 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.46■□□□□ 0.07
HMGN1P05114 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
HMGN1P05114 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGN1P05114 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGN1P05114 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
HMGN1P05114 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
HMGN1P05114 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
HMGN1P05114 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
HMGN1P05114 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
HMGN1P05114 HLA-A-202ENST00000376806 1854 ntBASIC15.46■□□□□ 0.06
HMGN1P05114 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
HMGN1P05114 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
HMGN1P05114 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
HMGN1P05114 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGN1P05114 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HMGN1P05114 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGN1P05114 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGN1P05114 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
HMGN1P05114 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.45■□□□□ 0.06
HMGN1P05114 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGN1P05114 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.45■□□□□ 0.06
HMGN1P05114 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.45■□□□□ 0.06
HMGN1P05114 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGN1P05114 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.45■□□□□ 0.06
HMGN1P05114 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HMGN1P05114 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGN1P05114 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGN1P05114 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGN1P05114 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGN1P05114 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGN1P05114 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.45■□□□□ 0.06
HMGN1P05114 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
HMGN1P05114 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
HMGN1P05114 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HMGN1P05114 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.45■□□□□ 0.06
HMGN1P05114 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.45■□□□□ 0.06
HMGN1P05114 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGN1P05114 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.45■□□□□ 0.06
HMGN1P05114 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.45■□□□□ 0.06
HMGN1P05114 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms