Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DPB1P04440 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 AC063926.3-201ENST00000624734 5658 ntBASIC15.36■□□□□ 0.05
HLA-DPB1P04440 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DPB1P04440 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 AL358472.4-201ENST00000633140 710 ntBASIC15.35■□□□□ 0.05
HLA-DPB1P04440 AL662844.4-201ENST00000606367 2838 ntBASIC15.35■□□□□ 0.05
HLA-DPB1P04440 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DPB1P04440 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms