Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC079140.1-201ENST00000508039 487 ntBASIC18.58■□□□□ 0.56
VTNP04004 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.58■□□□□ 0.56
VTNP04004 AC109322.1-201ENST00000524499 1264 ntBASIC18.58■□□□□ 0.56
VTNP04004 FAM86C2P-203ENST00000528684 1004 ntBASIC18.58■□□□□ 0.56
VTNP04004 AC243562.1-201ENST00000560672 389 ntBASIC18.58■□□□□ 0.56
VTNP04004 AC004449.1-201ENST00000564240 433 ntBASIC18.58■□□□□ 0.56
VTNP04004 RARRES2P8-201ENST00000566335 367 ntBASIC18.58■□□□□ 0.56
VTNP04004 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VTNP04004 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.58■□□□□ 0.56
VTNP04004 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VTNP04004 AC092053.1-201ENST00000605787 1936 ntBASIC18.58■□□□□ 0.56
VTNP04004 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
VTNP04004 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VTNP04004 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
VTNP04004 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.58■□□□□ 0.56
VTNP04004 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VTNP04004 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
VTNP04004 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.58■□□□□ 0.56
VTNP04004 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
VTNP04004 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VTNP04004 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
VTNP04004 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.57■□□□□ 0.56
VTNP04004 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.57■□□□□ 0.56
VTNP04004 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.57■□□□□ 0.56
VTNP04004 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
VTNP04004 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.57■□□□□ 0.56
VTNP04004 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VTNP04004 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
VTNP04004 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
VTNP04004 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
VTNP04004 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.57■□□□□ 0.56
VTNP04004 AC090340.1-201ENST00000620778 4980 ntBASIC18.57■□□□□ 0.56
VTNP04004 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VTNP04004 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VTNP04004 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VTNP04004 AL627223.1-201ENST00000416693 442 ntBASIC18.57■□□□□ 0.56
VTNP04004 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.57■□□□□ 0.56
VTNP04004 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.57■□□□□ 0.56
VTNP04004 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.57■□□□□ 0.56
VTNP04004 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.57■□□□□ 0.56
VTNP04004 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.57■□□□□ 0.56
VTNP04004 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.57■□□□□ 0.56
VTNP04004 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.57■□□□□ 0.56
VTNP04004 AC091167.2-201ENST00000579581 588 ntBASIC18.57■□□□□ 0.56
VTNP04004 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.57■□□□□ 0.56
VTNP04004 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VTNP04004 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VTNP04004 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.57■□□□□ 0.56
VTNP04004 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.57■□□□□ 0.56
VTNP04004 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VTNP04004 LINC02012-201ENST00000608206 1725 ntBASIC18.57■□□□□ 0.56
VTNP04004 AC131009.4-201ENST00000624048 1740 ntBASIC18.57■□□□□ 0.56
VTNP04004 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
VTNP04004 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
VTNP04004 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VTNP04004 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VTNP04004 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.56■□□□□ 0.56
VTNP04004 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VTNP04004 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.56■□□□□ 0.56
VTNP04004 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
VTNP04004 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VTNP04004 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VTNP04004 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VTNP04004 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
VTNP04004 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.56■□□□□ 0.56
VTNP04004 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VTNP04004 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
VTNP04004 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VTNP04004 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VTNP04004 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.56■□□□□ 0.56
VTNP04004 AC005237.2-201ENST00000434368 219 ntBASIC18.56■□□□□ 0.56
VTNP04004 AL592309.1-201ENST00000443127 649 ntBASIC18.56■□□□□ 0.56
VTNP04004 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.56■□□□□ 0.56
VTNP04004 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.56■□□□□ 0.56
VTNP04004 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.56■□□□□ 0.56
VTNP04004 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.56■□□□□ 0.56
VTNP04004 MPDU1-223ENST00000582151 728 ntBASIC18.56■□□□□ 0.56
VTNP04004 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.56■□□□□ 0.56
VTNP04004 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VTNP04004 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.56■□□□□ 0.56
VTNP04004 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
VTNP04004 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VTNP04004 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.56■□□□□ 0.56
VTNP04004 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
VTNP04004 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
VTNP04004 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTNP04004 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
VTNP04004 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTNP04004 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
VTNP04004 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
VTNP04004 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
VTNP04004 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VTNP04004 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTNP04004 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.55■□□□□ 0.56
VTNP04004 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTNP04004 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTNP04004 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VTNP04004 AC141586.5-201ENST00000624546 2050 ntBASIC18.55■□□□□ 0.56
VTNP04004 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
VTNP04004 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms