Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-ND3P03897 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-ND3P03897 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-ND3P03897 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-ND3P03897 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-ND3P03897 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND3P03897 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND3P03897 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND3P03897 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND3P03897 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.4■□□□□ 0.38
MT-ND3P03897 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND3P03897 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
MT-ND3P03897 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND3P03897 AC092171.3-201ENST00000610122 2651 ntBASIC17.4■□□□□ 0.38
MT-ND3P03897 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.4■□□□□ 0.38
MT-ND3P03897 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND3P03897 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.4■□□□□ 0.38
MT-ND3P03897 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
MT-ND3P03897 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND3P03897 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
MT-ND3P03897 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
MT-ND3P03897 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.4■□□□□ 0.38
MT-ND3P03897 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
MT-ND3P03897 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.4■□□□□ 0.38
MT-ND3P03897 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.4■□□□□ 0.38
MT-ND3P03897 AC124947.2-201ENST00000547118 1133 ntBASIC17.4■□□□□ 0.38
MT-ND3P03897 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.4■□□□□ 0.38
MT-ND3P03897 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.4■□□□□ 0.38
MT-ND3P03897 AC091304.2-201ENST00000564639 760 ntBASIC17.4■□□□□ 0.38
MT-ND3P03897 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.4■□□□□ 0.38
MT-ND3P03897 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.4■□□□□ 0.38
MT-ND3P03897 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.4■□□□□ 0.38
MT-ND3P03897 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
MT-ND3P03897 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND3P03897 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND3P03897 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND3P03897 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.4■□□□□ 0.38
MT-ND3P03897 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
MT-ND3P03897 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND3P03897 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND3P03897 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND3P03897 AC097374.2-201ENST00000618617 1306 ntBASIC17.4■□□□□ 0.38
MT-ND3P03897 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND3P03897 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND3P03897 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.4■□□□□ 0.38
MT-ND3P03897 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND3P03897 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.4■□□□□ 0.38
MT-ND3P03897 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND3P03897 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND3P03897 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND3P03897 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
MT-ND3P03897 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.39■□□□□ 0.38
MT-ND3P03897 AC008741.2-201ENST00000612792 3115 ntBASIC17.39■□□□□ 0.37
MT-ND3P03897 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND3P03897 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
MT-ND3P03897 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND3P03897 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND3P03897 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND3P03897 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND3P03897 CICP6-201ENST00000457191 2729 ntBASIC17.39■□□□□ 0.37
MT-ND3P03897 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
MT-ND3P03897 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND3P03897 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
MT-ND3P03897 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.39■□□□□ 0.37
MT-ND3P03897 TSPY19P-201ENST00000418461 509 ntBASIC17.39■□□□□ 0.37
MT-ND3P03897 TSPY18P-201ENST00000441642 509 ntBASIC17.39■□□□□ 0.37
MT-ND3P03897 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.39■□□□□ 0.37
MT-ND3P03897 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND3P03897 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
MT-ND3P03897 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
MT-ND3P03897 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND3P03897 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND3P03897 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND3P03897 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND3P03897 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND3P03897 AC010460.3-201ENST00000511359 1579 ntBASIC17.39■□□□□ 0.37
MT-ND3P03897 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
MT-ND3P03897 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.39■□□□□ 0.37
MT-ND3P03897 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND3P03897 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.39■□□□□ 0.37
MT-ND3P03897 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
MT-ND3P03897 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND3P03897 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND3P03897 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND3P03897 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
MT-ND3P03897 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
MT-ND3P03897 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND3P03897 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND3P03897 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND3P03897 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND3P03897 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND3P03897 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND3P03897 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND3P03897 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.38■□□□□ 0.37
MT-ND3P03897 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
MT-ND3P03897 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND3P03897 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.38■□□□□ 0.37
MT-ND3P03897 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND3P03897 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND3P03897 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms