Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 AP002490.2-201ENST00000524791 560 ntBASIC12.86□□□□□ -0.35
HLA-DQA1P01909 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 MIR3180-4-201ENST00000582223 153 ntBASIC12.86□□□□□ -0.35
HLA-DQA1P01909 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DQA1P01909 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.84□□□□□ -0.35
HLA-DQA1P01909 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC12.84□□□□□ -0.35
HLA-DQA1P01909 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
HLA-DQA1P01909 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.84□□□□□ -0.35
HLA-DQA1P01909 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
HLA-DQA1P01909 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DQA1P01909 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DQA1P01909 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DQA1P01909 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DQA1P01909 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.84□□□□□ -0.35
HLA-DQA1P01909 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DQA1P01909 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DQA1P01909 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms