Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.29■□□□□ 0.52
HLA-DRAP01903 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
HLA-DRAP01903 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-DRAP01903 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DRAP01903 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DRAP01903 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HLA-DRAP01903 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DRAP01903 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.29■□□□□ 0.52
HLA-DRAP01903 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-DRAP01903 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DRAP01903 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DRAP01903 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HLA-DRAP01903 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DRAP01903 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-DRAP01903 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
HLA-DRAP01903 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DRAP01903 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.29■□□□□ 0.52
HLA-DRAP01903 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.29■□□□□ 0.52
HLA-DRAP01903 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DRAP01903 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DRAP01903 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DRAP01903 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.29■□□□□ 0.52
HLA-DRAP01903 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.28■□□□□ 0.52
HLA-DRAP01903 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DRAP01903 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DRAP01903 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HLA-DRAP01903 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.28■□□□□ 0.52
HLA-DRAP01903 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DRAP01903 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HLA-DRAP01903 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.28■□□□□ 0.52
HLA-DRAP01903 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DRAP01903 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.28■□□□□ 0.52
HLA-DRAP01903 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DRAP01903 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.28■□□□□ 0.52
HLA-DRAP01903 AL590627.1-203ENST00000421194 1026 ntBASIC18.28■□□□□ 0.52
HLA-DRAP01903 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.28■□□□□ 0.52
HLA-DRAP01903 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.28■□□□□ 0.52
HLA-DRAP01903 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
HLA-DRAP01903 AC107918.2-201ENST00000530817 355 ntBASIC18.28■□□□□ 0.52
HLA-DRAP01903 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.28■□□□□ 0.52
HLA-DRAP01903 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DRAP01903 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DRAP01903 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DRAP01903 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.28■□□□□ 0.52
HLA-DRAP01903 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
HLA-DRAP01903 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
HLA-DRAP01903 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DRAP01903 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
HLA-DRAP01903 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DRAP01903 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HLA-DRAP01903 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DRAP01903 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DRAP01903 TOP3BP1-201ENST00000420768 1380 ntBASIC18.28■□□□□ 0.52
HLA-DRAP01903 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DRAP01903 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.28■□□□□ 0.52
HLA-DRAP01903 RNF216P1-203ENST00000404404 2427 ntBASIC18.28■□□□□ 0.52
HLA-DRAP01903 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DRAP01903 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HLA-DRAP01903 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.27■□□□□ 0.52
HLA-DRAP01903 AC009053.2-201ENST00000563701 2365 ntBASIC18.27■□□□□ 0.52
HLA-DRAP01903 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
HLA-DRAP01903 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DRAP01903 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DRAP01903 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.27■□□□□ 0.52
HLA-DRAP01903 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
HLA-DRAP01903 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.27■□□□□ 0.52
HLA-DRAP01903 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.27■□□□□ 0.52
HLA-DRAP01903 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DRAP01903 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DRAP01903 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.27■□□□□ 0.52
HLA-DRAP01903 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DRAP01903 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DRAP01903 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.27■□□□□ 0.52
HLA-DRAP01903 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.27■□□□□ 0.52
HLA-DRAP01903 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DRAP01903 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.27■□□□□ 0.52
HLA-DRAP01903 MIR4751-201ENST00000578027 74 ntBASIC18.27■□□□□ 0.52
HLA-DRAP01903 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DRAP01903 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.27■□□□□ 0.52
HLA-DRAP01903 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DRAP01903 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DRAP01903 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DRAP01903 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DRAP01903 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.27■□□□□ 0.52
HLA-DRAP01903 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HLA-DRAP01903 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.27■□□□□ 0.51
HLA-DRAP01903 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HLA-DRAP01903 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HLA-DRAP01903 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DRAP01903 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DRAP01903 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.26■□□□□ 0.51
HLA-DRAP01903 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DRAP01903 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DRAP01903 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-DRAP01903 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DRAP01903 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
HLA-DRAP01903 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.26■□□□□ 0.51
HLA-DRAP01903 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DRAP01903 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DRAP01903 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms