Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV12-3P01733 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV12-3P01733 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV12-3P01733 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV12-3P01733 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV12-3P01733 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV12-3P01733 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV12-3P01733 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV12-3P01733 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV12-3P01733 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV12-3P01733 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.17□□□□□ -0.3
TRBV12-3P01733 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV12-3P01733 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV12-3P01733 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.16□□□□□ -0.3
TRBV12-3P01733 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.16□□□□□ -0.3
TRBV12-3P01733 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TRBV12-3P01733 AC104109.2-201ENST00000602919 1418 ntBASIC13.16□□□□□ -0.3
TRBV12-3P01733 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TRBV12-3P01733 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.16□□□□□ -0.3
TRBV12-3P01733 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.16□□□□□ -0.3
TRBV12-3P01733 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.16□□□□□ -0.3
TRBV12-3P01733 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TRBV12-3P01733 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 AC009947.1-201ENST00000444350 727 ntBASIC13.16□□□□□ -0.3
TRBV12-3P01733 RPL13AP23-201ENST00000480739 586 ntBASIC13.16□□□□□ -0.3
TRBV12-3P01733 SLC25A6P2-201ENST00000497974 877 ntBASIC13.16□□□□□ -0.3
TRBV12-3P01733 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TRBV12-3P01733 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.16□□□□□ -0.3
TRBV12-3P01733 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.16□□□□□ -0.3
TRBV12-3P01733 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.16□□□□□ -0.3
TRBV12-3P01733 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.16□□□□□ -0.3
TRBV12-3P01733 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.16□□□□□ -0.3
TRBV12-3P01733 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.16□□□□□ -0.3
TRBV12-3P01733 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.16□□□□□ -0.3
TRBV12-3P01733 PGM5P2-202ENST00000637225 1043 ntBASIC13.16□□□□□ -0.3
TRBV12-3P01733 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.16□□□□□ -0.3
TRBV12-3P01733 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.16□□□□□ -0.3
TRBV12-3P01733 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TRBV12-3P01733 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV12-3P01733 WAC-202ENST00000347934 2839 ntTSL 5 BASIC13.16□□□□□ -0.3
TRBV12-3P01733 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TRBV12-3P01733 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV12-3P01733 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV12-3P01733 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV12-3P01733 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV12-3P01733 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV12-3P01733 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV12-3P01733 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV12-3P01733 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV12-3P01733 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV12-3P01733 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 AC124947.2-201ENST00000547118 1133 ntBASIC13.15□□□□□ -0.3
TRBV12-3P01733 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV12-3P01733 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 DUX4L17-201ENST00000557360 1267 ntBASIC13.15□□□□□ -0.3
TRBV12-3P01733 MIR4751-201ENST00000578027 74 ntBASIC13.15□□□□□ -0.3
TRBV12-3P01733 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV12-3P01733 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV12-3P01733 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 BX640515.1-201ENST00000617215 977 ntBASIC13.15□□□□□ -0.3
TRBV12-3P01733 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms