Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 AC013268.4-201ENST00000637413 2228 ntBASIC14.31□□□□□ -0.12
SIX6O95475 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SIX6O95475 CICP13-201ENST00000422015 2789 ntBASIC14.31□□□□□ -0.12
SIX6O95475 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.31□□□□□ -0.12
SIX6O95475 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
SIX6O95475 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SIX6O95475 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.31□□□□□ -0.12
SIX6O95475 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 AC104581.4-201ENST00000623126 3052 ntBASIC14.3□□□□□ -0.12
SIX6O95475 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SIX6O95475 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.3□□□□□ -0.12
SIX6O95475 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SIX6O95475 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SIX6O95475 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIX6O95475 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
SIX6O95475 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIX6O95475 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SIX6O95475 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.3□□□□□ -0.12
SIX6O95475 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.3□□□□□ -0.12
SIX6O95475 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SIX6O95475 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIX6O95475 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
SIX6O95475 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.3□□□□□ -0.12
SIX6O95475 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIX6O95475 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.3□□□□□ -0.12
SIX6O95475 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIX6O95475 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIX6O95475 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIX6O95475 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIX6O95475 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SIX6O95475 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.3□□□□□ -0.12
SIX6O95475 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.3□□□□□ -0.12
SIX6O95475 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.3□□□□□ -0.12
SIX6O95475 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.3□□□□□ -0.12
SIX6O95475 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.3□□□□□ -0.12
SIX6O95475 AC124016.1-201ENST00000609552 612 ntBASIC14.3□□□□□ -0.12
SIX6O95475 AC110285.5-201ENST00000611501 352 ntBASIC14.3□□□□□ -0.12
SIX6O95475 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIX6O95475 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.3□□□□□ -0.12
SIX6O95475 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.3□□□□□ -0.12
SIX6O95475 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.3□□□□□ -0.12
SIX6O95475 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIX6O95475 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SIX6O95475 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SIX6O95475 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIX6O95475 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.3□□□□□ -0.12
SIX6O95475 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
SIX6O95475 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.3□□□□□ -0.12
SIX6O95475 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.3□□□□□ -0.12
SIX6O95475 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SIX6O95475 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.3□□□□□ -0.12
SIX6O95475 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIX6O95475 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.3□□□□□ -0.12
SIX6O95475 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.3□□□□□ -0.12
SIX6O95475 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIX6O95475 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SIX6O95475 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SIX6O95475 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SIX6O95475 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SIX6O95475 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SIX6O95475 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
SIX6O95475 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SIX6O95475 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIX6O95475 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.29□□□□□ -0.12
SIX6O95475 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SIX6O95475 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIX6O95475 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.29□□□□□ -0.12
SIX6O95475 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.29□□□□□ -0.12
SIX6O95475 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.29□□□□□ -0.12
SIX6O95475 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIX6O95475 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIX6O95475 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIX6O95475 KRT18P29-201ENST00000397031 1267 ntBASIC14.29□□□□□ -0.12
SIX6O95475 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIX6O95475 AL162430.1-201ENST00000480705 870 ntBASIC14.29□□□□□ -0.12
SIX6O95475 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.29□□□□□ -0.12
SIX6O95475 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
SIX6O95475 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.29□□□□□ -0.12
SIX6O95475 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SIX6O95475 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIX6O95475 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIX6O95475 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIX6O95475 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SIX6O95475 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.29□□□□□ -0.12
SIX6O95475 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SIX6O95475 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SIX6O95475 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.29□□□□□ -0.12
SIX6O95475 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SIX6O95475 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms