Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG5O95196 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.29■□□□□ 0.52
CSPG5O95196 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG5O95196 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG5O95196 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.29■□□□□ 0.52
CSPG5O95196 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CSPG5O95196 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG5O95196 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG5O95196 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.29■□□□□ 0.52
CSPG5O95196 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG5O95196 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CSPG5O95196 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG5O95196 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CSPG5O95196 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CSPG5O95196 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.28■□□□□ 0.52
CSPG5O95196 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.28■□□□□ 0.52
CSPG5O95196 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG5O95196 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG5O95196 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG5O95196 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.28■□□□□ 0.52
CSPG5O95196 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG5O95196 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.28■□□□□ 0.52
CSPG5O95196 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.28■□□□□ 0.52
CSPG5O95196 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG5O95196 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.28■□□□□ 0.52
CSPG5O95196 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CSPG5O95196 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG5O95196 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG5O95196 NOC2LP2-201ENST00000407594 1944 ntBASIC18.28■□□□□ 0.52
CSPG5O95196 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG5O95196 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.28■□□□□ 0.52
CSPG5O95196 ACTG1P4-201ENST00000425123 1122 ntBASIC18.28■□□□□ 0.52
CSPG5O95196 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.28■□□□□ 0.52
CSPG5O95196 RNA5SP421-201ENST00000516864 134 ntBASIC18.28■□□□□ 0.52
CSPG5O95196 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG5O95196 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.28■□□□□ 0.52
CSPG5O95196 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG5O95196 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.28■□□□□ 0.52
CSPG5O95196 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.28■□□□□ 0.52
CSPG5O95196 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.28■□□□□ 0.52
CSPG5O95196 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG5O95196 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CSPG5O95196 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG5O95196 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG5O95196 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG5O95196 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG5O95196 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CSPG5O95196 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.28■□□□□ 0.52
CSPG5O95196 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CSPG5O95196 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG5O95196 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSPG5O95196 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.28■□□□□ 0.52
CSPG5O95196 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CSPG5O95196 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSPG5O95196 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.27■□□□□ 0.52
CSPG5O95196 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.27■□□□□ 0.52
CSPG5O95196 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CSPG5O95196 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSPG5O95196 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CSPG5O95196 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CSPG5O95196 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CSPG5O95196 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CSPG5O95196 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CSPG5O95196 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.27■□□□□ 0.52
CSPG5O95196 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CSPG5O95196 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.27■□□□□ 0.52
CSPG5O95196 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.27■□□□□ 0.52
CSPG5O95196 TREML5P-201ENST00000421694 576 ntBASIC18.27■□□□□ 0.52
CSPG5O95196 BASP1P1-201ENST00000430708 665 ntBASIC18.27■□□□□ 0.52
CSPG5O95196 RBPMS2P1-201ENST00000437762 623 ntBASIC18.27■□□□□ 0.52
CSPG5O95196 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.27■□□□□ 0.52
CSPG5O95196 HLA-J-202ENST00000469281 1241 ntBASIC18.27■□□□□ 0.52
CSPG5O95196 AC067863.1-201ENST00000494933 530 ntBASIC18.27■□□□□ 0.52
CSPG5O95196 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.27■□□□□ 0.52
CSPG5O95196 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.27■□□□□ 0.52
CSPG5O95196 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.27■□□□□ 0.52
CSPG5O95196 AL135744.1-201ENST00000565098 629 ntBASIC18.27■□□□□ 0.52
CSPG5O95196 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSPG5O95196 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CSPG5O95196 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.27■□□□□ 0.52
CSPG5O95196 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.27■□□□□ 0.52
CSPG5O95196 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.27■□□□□ 0.52
CSPG5O95196 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CSPG5O95196 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.27■□□□□ 0.52
CSPG5O95196 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.27■□□□□ 0.52
CSPG5O95196 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSPG5O95196 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.27■□□□□ 0.52
CSPG5O95196 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CSPG5O95196 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CSPG5O95196 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.51
CSPG5O95196 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CSPG5O95196 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.27■□□□□ 0.51
CSPG5O95196 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.27■□□□□ 0.51
CSPG5O95196 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.27■□□□□ 0.51
CSPG5O95196 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CSPG5O95196 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG5O95196 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CSPG5O95196 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.26■□□□□ 0.51
CSPG5O95196 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG5O95196 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms