Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
CLSTN1O94985 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLSTN1O94985 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.91■□□□□ 0.62
CLSTN1O94985 AL138688.1-201ENST00000624851 1594 ntBASIC18.91■□□□□ 0.62
CLSTN1O94985 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLSTN1O94985 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLSTN1O94985 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLSTN1O94985 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.91■□□□□ 0.62
CLSTN1O94985 DUSP5P1-201ENST00000441325 1139 ntBASIC18.91■□□□□ 0.62
CLSTN1O94985 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.91■□□□□ 0.62
CLSTN1O94985 AC132008.2-207ENST00000454517 770 ntBASIC18.91■□□□□ 0.62
CLSTN1O94985 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.91■□□□□ 0.62
CLSTN1O94985 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.91■□□□□ 0.62
CLSTN1O94985 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLSTN1O94985 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLSTN1O94985 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.91■□□□□ 0.62
CLSTN1O94985 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC18.91■□□□□ 0.62
CLSTN1O94985 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLSTN1O94985 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.91■□□□□ 0.62
CLSTN1O94985 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLSTN1O94985 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLSTN1O94985 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.91■□□□□ 0.62
CLSTN1O94985 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.91■□□□□ 0.62
CLSTN1O94985 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLSTN1O94985 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLSTN1O94985 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.91■□□□□ 0.62
CLSTN1O94985 KRT8P10-201ENST00000450021 1447 ntBASIC18.91■□□□□ 0.62
CLSTN1O94985 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLSTN1O94985 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLSTN1O94985 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
CLSTN1O94985 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLSTN1O94985 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLSTN1O94985 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLSTN1O94985 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLSTN1O94985 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLSTN1O94985 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLSTN1O94985 AC022211.2-201ENST00000585075 2527 ntBASIC18.9■□□□□ 0.62
CLSTN1O94985 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.9■□□□□ 0.62
CLSTN1O94985 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.9■□□□□ 0.62
CLSTN1O94985 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLSTN1O94985 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.9■□□□□ 0.62
CLSTN1O94985 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLSTN1O94985 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.9■□□□□ 0.62
CLSTN1O94985 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.9■□□□□ 0.62
CLSTN1O94985 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.9■□□□□ 0.62
CLSTN1O94985 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.9■□□□□ 0.62
CLSTN1O94985 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.9■□□□□ 0.62
CLSTN1O94985 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.9■□□□□ 0.62
CLSTN1O94985 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.9■□□□□ 0.62
CLSTN1O94985 AC073592.5-201ENST00000624854 528 ntBASIC18.9■□□□□ 0.62
CLSTN1O94985 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.9■□□□□ 0.62
CLSTN1O94985 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.9■□□□□ 0.62
CLSTN1O94985 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.9■□□□□ 0.62
CLSTN1O94985 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLSTN1O94985 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLSTN1O94985 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CLSTN1O94985 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLSTN1O94985 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLSTN1O94985 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLSTN1O94985 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLSTN1O94985 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLSTN1O94985 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLSTN1O94985 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.9■□□□□ 0.62
CLSTN1O94985 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
CLSTN1O94985 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLSTN1O94985 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLSTN1O94985 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLSTN1O94985 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.9■□□□□ 0.62
CLSTN1O94985 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLSTN1O94985 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.89■□□□□ 0.62
CLSTN1O94985 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CLSTN1O94985 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLSTN1O94985 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLSTN1O94985 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLSTN1O94985 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLSTN1O94985 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.89■□□□□ 0.61
CLSTN1O94985 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLSTN1O94985 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLSTN1O94985 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLSTN1O94985 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.89■□□□□ 0.61
CLSTN1O94985 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLSTN1O94985 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLSTN1O94985 MYCLP1-201ENST00000372451 1075 ntBASIC18.89■□□□□ 0.61
CLSTN1O94985 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLSTN1O94985 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLSTN1O94985 TSPY19P-201ENST00000418461 509 ntBASIC18.89■□□□□ 0.61
CLSTN1O94985 AL450487.1-201ENST00000426799 995 ntBASIC18.89■□□□□ 0.61
CLSTN1O94985 TSPY18P-201ENST00000441642 509 ntBASIC18.89■□□□□ 0.61
CLSTN1O94985 AC002558.1-201ENST00000488906 803 ntBASIC18.89■□□□□ 0.61
CLSTN1O94985 STK19B-204ENST00000512515 211 ntBASIC18.89■□□□□ 0.61
CLSTN1O94985 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.89■□□□□ 0.61
CLSTN1O94985 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLSTN1O94985 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.89■□□□□ 0.61
CLSTN1O94985 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CLSTN1O94985 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.89■□□□□ 0.61
CLSTN1O94985 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLSTN1O94985 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CLSTN1O94985 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLSTN1O94985 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLSTN1O94985 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms