Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.96■□□□□ 0.31
KLHL41O60662 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
KLHL41O60662 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL41O60662 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL41O60662 AL592071.1-201ENST00000611956 408 ntBASIC16.96■□□□□ 0.31
KLHL41O60662 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL41O60662 AC009154.2-201ENST00000621177 724 ntBASIC16.96■□□□□ 0.31
KLHL41O60662 AC124864.1-201ENST00000623408 392 ntBASIC16.96■□□□□ 0.31
KLHL41O60662 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.96■□□□□ 0.31
KLHL41O60662 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.96■□□□□ 0.31
KLHL41O60662 AL353692.3-201ENST00000407031 1396 ntBASIC16.96■□□□□ 0.31
KLHL41O60662 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL41O60662 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL41O60662 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL41O60662 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.96■□□□□ 0.31
KLHL41O60662 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL41O60662 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL41O60662 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.96■□□□□ 0.31
KLHL41O60662 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL41O60662 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.96■□□□□ 0.31
KLHL41O60662 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
KLHL41O60662 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
KLHL41O60662 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
KLHL41O60662 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
KLHL41O60662 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
KLHL41O60662 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.96■□□□□ 0.3
KLHL41O60662 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.96■□□□□ 0.3
KLHL41O60662 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.96■□□□□ 0.3
KLHL41O60662 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL41O60662 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL41O60662 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL41O60662 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.95■□□□□ 0.3
KLHL41O60662 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.95■□□□□ 0.3
KLHL41O60662 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
KLHL41O60662 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL41O60662 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL41O60662 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.95■□□□□ 0.3
KLHL41O60662 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL41O60662 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL41O60662 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL41O60662 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL41O60662 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL41O60662 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.95■□□□□ 0.3
KLHL41O60662 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL41O60662 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL41O60662 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL41O60662 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL41O60662 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.95■□□□□ 0.3
KLHL41O60662 UNC93B7-201ENST00000509439 705 ntBASIC16.95■□□□□ 0.3
KLHL41O60662 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.95■□□□□ 0.3
KLHL41O60662 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.95■□□□□ 0.3
KLHL41O60662 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
KLHL41O60662 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.95■□□□□ 0.3
KLHL41O60662 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.95■□□□□ 0.3
KLHL41O60662 AC099336.1-202ENST00000602961 463 ntBASIC16.95■□□□□ 0.3
KLHL41O60662 AC004263.2-201ENST00000617183 678 ntBASIC16.95■□□□□ 0.3
KLHL41O60662 AC092068.3-201ENST00000587894 2016 ntBASIC16.95■□□□□ 0.3
KLHL41O60662 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL41O60662 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.95■□□□□ 0.3
KLHL41O60662 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL41O60662 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.95■□□□□ 0.3
KLHL41O60662 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL41O60662 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL41O60662 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL41O60662 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL41O60662 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
KLHL41O60662 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
KLHL41O60662 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL41O60662 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.94■□□□□ 0.3
KLHL41O60662 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.94■□□□□ 0.3
KLHL41O60662 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
KLHL41O60662 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.94■□□□□ 0.3
KLHL41O60662 PCDHA1-201ENST00000378133 2726 ntBASIC16.94■□□□□ 0.3
KLHL41O60662 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
KLHL41O60662 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
KLHL41O60662 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.94■□□□□ 0.3
KLHL41O60662 TSPY12P-201ENST00000421279 868 ntBASIC16.94■□□□□ 0.3
KLHL41O60662 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.94■□□□□ 0.3
KLHL41O60662 EMBP1-201ENST00000458200 901 ntBASIC16.94■□□□□ 0.3
KLHL41O60662 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.94■□□□□ 0.3
KLHL41O60662 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.94■□□□□ 0.3
KLHL41O60662 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.94■□□□□ 0.3
KLHL41O60662 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms