Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN3O60637 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
TSPAN3O60637 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN3O60637 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN3O60637 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN3O60637 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN3O60637 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.54■□□□□ 0.4
TSPAN3O60637 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN3O60637 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TSPAN3O60637 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN3O60637 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
TSPAN3O60637 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TSPAN3O60637 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN3O60637 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.53■□□□□ 0.4
TSPAN3O60637 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
TSPAN3O60637 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN3O60637 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN3O60637 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN3O60637 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TSPAN3O60637 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN3O60637 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN3O60637 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN3O60637 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN3O60637 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN3O60637 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN3O60637 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TSPAN3O60637 AC074386.1-202ENST00000463561 864 ntBASIC17.53■□□□□ 0.4
TSPAN3O60637 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.53■□□□□ 0.4
TSPAN3O60637 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN3O60637 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.53■□□□□ 0.4
TSPAN3O60637 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN3O60637 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TSPAN3O60637 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN3O60637 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TSPAN3O60637 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TSPAN3O60637 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TSPAN3O60637 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TSPAN3O60637 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.52■□□□□ 0.4
TSPAN3O60637 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.52■□□□□ 0.4
TSPAN3O60637 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TSPAN3O60637 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TSPAN3O60637 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TSPAN3O60637 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.52■□□□□ 0.4
TSPAN3O60637 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
TSPAN3O60637 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TSPAN3O60637 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TSPAN3O60637 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TSPAN3O60637 AC139713.2-201ENST00000641328 2723 ntBASIC17.52■□□□□ 0.4
TSPAN3O60637 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TSPAN3O60637 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.52■□□□□ 0.4
TSPAN3O60637 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.52■□□□□ 0.4
TSPAN3O60637 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.52■□□□□ 0.4
TSPAN3O60637 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.52■□□□□ 0.4
TSPAN3O60637 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.52■□□□□ 0.4
TSPAN3O60637 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.52■□□□□ 0.4
TSPAN3O60637 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.52■□□□□ 0.4
TSPAN3O60637 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.52■□□□□ 0.4
TSPAN3O60637 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
TSPAN3O60637 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.52■□□□□ 0.4
TSPAN3O60637 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.52■□□□□ 0.4
TSPAN3O60637 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TSPAN3O60637 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.52■□□□□ 0.4
TSPAN3O60637 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TSPAN3O60637 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TSPAN3O60637 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.52■□□□□ 0.39
TSPAN3O60637 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TSPAN3O60637 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TSPAN3O60637 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TSPAN3O60637 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TSPAN3O60637 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TSPAN3O60637 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.51■□□□□ 0.39
TSPAN3O60637 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
TSPAN3O60637 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN3O60637 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN3O60637 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.51■□□□□ 0.39
TSPAN3O60637 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN3O60637 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN3O60637 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TSPAN3O60637 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN3O60637 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN3O60637 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TSPAN3O60637 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN3O60637 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN3O60637 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN3O60637 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.51■□□□□ 0.39
TSPAN3O60637 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.51■□□□□ 0.39
TSPAN3O60637 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.51■□□□□ 0.39
TSPAN3O60637 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TSPAN3O60637 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.51■□□□□ 0.39
TSPAN3O60637 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN3O60637 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.51■□□□□ 0.39
TSPAN3O60637 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN3O60637 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.51■□□□□ 0.39
TSPAN3O60637 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.51■□□□□ 0.39
TSPAN3O60637 AC005829.1-201ENST00000570002 483 ntBASIC17.51■□□□□ 0.39
TSPAN3O60637 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.51■□□□□ 0.39
TSPAN3O60637 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN3O60637 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TSPAN3O60637 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TSPAN3O60637 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms