Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC120114.3-201ENST00000611923 658 ntBASIC16.28■□□□□ 0.2
LCMT2O60294 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.28■□□□□ 0.2
LCMT2O60294 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.28■□□□□ 0.2
LCMT2O60294 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.28■□□□□ 0.2
LCMT2O60294 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LCMT2O60294 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LCMT2O60294 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LCMT2O60294 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LCMT2O60294 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LCMT2O60294 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCMT2O60294 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.28■□□□□ 0.2
LCMT2O60294 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCMT2O60294 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCMT2O60294 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCMT2O60294 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCMT2O60294 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LCMT2O60294 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LCMT2O60294 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LCMT2O60294 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LCMT2O60294 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LCMT2O60294 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LCMT2O60294 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.27■□□□□ 0.2
LCMT2O60294 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LCMT2O60294 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.27■□□□□ 0.2
LCMT2O60294 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LCMT2O60294 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LCMT2O60294 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LCMT2O60294 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.27■□□□□ 0.2
LCMT2O60294 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LCMT2O60294 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LCMT2O60294 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
LCMT2O60294 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
LCMT2O60294 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LCMT2O60294 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.27■□□□□ 0.2
LCMT2O60294 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LCMT2O60294 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
LCMT2O60294 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.27■□□□□ 0.2
LCMT2O60294 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.27■□□□□ 0.2
LCMT2O60294 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.27■□□□□ 0.2
LCMT2O60294 AC034105.1-201ENST00000563488 319 ntBASIC16.27■□□□□ 0.2
LCMT2O60294 AC145285.3-201ENST00000564603 959 ntBASIC16.27■□□□□ 0.2
LCMT2O60294 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.27■□□□□ 0.2
LCMT2O60294 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LCMT2O60294 Z83851.2-201ENST00000609564 659 ntBASIC16.27■□□□□ 0.2
LCMT2O60294 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LCMT2O60294 REXO1L3P-201ENST00000622202 1288 ntBASIC16.27■□□□□ 0.2
LCMT2O60294 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LCMT2O60294 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.27■□□□□ 0.2
LCMT2O60294 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LCMT2O60294 AC106886.4-201ENST00000623557 2502 ntBASIC16.27■□□□□ 0.2
LCMT2O60294 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LCMT2O60294 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.27■□□□□ 0.19
LCMT2O60294 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.27■□□□□ 0.19
LCMT2O60294 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.27■□□□□ 0.19
LCMT2O60294 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
LCMT2O60294 AC104109.2-201ENST00000602919 1418 ntBASIC16.27■□□□□ 0.19
LCMT2O60294 AL121761.2-201ENST00000598007 1648 ntBASIC16.27■□□□□ 0.19
LCMT2O60294 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LCMT2O60294 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.26■□□□□ 0.19
LCMT2O60294 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LCMT2O60294 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.26■□□□□ 0.19
LCMT2O60294 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LCMT2O60294 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.26■□□□□ 0.19
LCMT2O60294 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LCMT2O60294 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LCMT2O60294 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LCMT2O60294 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LCMT2O60294 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LCMT2O60294 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LCMT2O60294 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LCMT2O60294 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LCMT2O60294 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LCMT2O60294 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LCMT2O60294 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.26■□□□□ 0.19
LCMT2O60294 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LCMT2O60294 MRPL20P1-201ENST00000400819 433 ntBASIC16.26■□□□□ 0.19
LCMT2O60294 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
LCMT2O60294 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.26■□□□□ 0.19
LCMT2O60294 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LCMT2O60294 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LCMT2O60294 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.26■□□□□ 0.19
LCMT2O60294 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.26■□□□□ 0.19
LCMT2O60294 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LCMT2O60294 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LCMT2O60294 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LCMT2O60294 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LCMT2O60294 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.26■□□□□ 0.19
LCMT2O60294 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.26■□□□□ 0.19
LCMT2O60294 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LCMT2O60294 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LCMT2O60294 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LCMT2O60294 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LCMT2O60294 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LCMT2O60294 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.26■□□□□ 0.19
LCMT2O60294 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LCMT2O60294 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.25■□□□□ 0.19
LCMT2O60294 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LCMT2O60294 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LCMT2O60294 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.25■□□□□ 0.19
LCMT2O60294 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms