Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
ITM2AO43736 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ITM2AO43736 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITM2AO43736 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.73■□□□□ 0.27
ITM2AO43736 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITM2AO43736 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITM2AO43736 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ITM2AO43736 AC005521.1-201ENST00000393351 872 ntBASIC16.73■□□□□ 0.27
ITM2AO43736 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITM2AO43736 TSPY22P-201ENST00000427496 604 ntBASIC16.73■□□□□ 0.27
ITM2AO43736 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.73■□□□□ 0.27
ITM2AO43736 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.73■□□□□ 0.27
ITM2AO43736 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ITM2AO43736 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ITM2AO43736 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ITM2AO43736 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ITM2AO43736 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITM2AO43736 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITM2AO43736 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ITM2AO43736 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.73■□□□□ 0.27
ITM2AO43736 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ITM2AO43736 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.73■□□□□ 0.27
ITM2AO43736 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITM2AO43736 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ITM2AO43736 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ITM2AO43736 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ITM2AO43736 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITM2AO43736 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
ITM2AO43736 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ITM2AO43736 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITM2AO43736 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ITM2AO43736 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITM2AO43736 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ITM2AO43736 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITM2AO43736 TUBB8P12-201ENST00000308911 1335 ntBASIC16.72■□□□□ 0.27
ITM2AO43736 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITM2AO43736 TUBB7P-202ENST00000428444 1305 ntBASIC16.72■□□□□ 0.27
ITM2AO43736 TUBB8P7-204ENST00000567960 1332 ntBASIC16.72■□□□□ 0.27
ITM2AO43736 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.72■□□□□ 0.27
ITM2AO43736 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.72■□□□□ 0.27
ITM2AO43736 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITM2AO43736 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.72■□□□□ 0.27
ITM2AO43736 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.72■□□□□ 0.27
ITM2AO43736 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ITM2AO43736 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITM2AO43736 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.72■□□□□ 0.27
ITM2AO43736 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ITM2AO43736 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.72■□□□□ 0.27
ITM2AO43736 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
ITM2AO43736 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.72■□□□□ 0.27
ITM2AO43736 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ITM2AO43736 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITM2AO43736 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITM2AO43736 KRT18P57-201ENST00000443599 1254 ntBASIC16.72■□□□□ 0.27
ITM2AO43736 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITM2AO43736 AC091607.1-201ENST00000490318 1060 ntBASIC16.72■□□□□ 0.27
ITM2AO43736 AP002490.2-201ENST00000524791 560 ntBASIC16.72■□□□□ 0.27
ITM2AO43736 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.72■□□□□ 0.27
ITM2AO43736 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ITM2AO43736 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.72■□□□□ 0.27
ITM2AO43736 AD001527.2-201ENST00000622994 785 ntBASIC16.72■□□□□ 0.27
ITM2AO43736 AC133561.5-201ENST00000635547 218 ntBASIC16.72■□□□□ 0.27
ITM2AO43736 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITM2AO43736 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ITM2AO43736 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITM2AO43736 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITM2AO43736 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
ITM2AO43736 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITM2AO43736 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITM2AO43736 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ITM2AO43736 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.72■□□□□ 0.27
ITM2AO43736 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ITM2AO43736 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITM2AO43736 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ITM2AO43736 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITM2AO43736 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ITM2AO43736 ME2P1-201ENST00000426028 1970 ntBASIC16.71■□□□□ 0.27
ITM2AO43736 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ITM2AO43736 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.71■□□□□ 0.27
ITM2AO43736 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
ITM2AO43736 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ITM2AO43736 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITM2AO43736 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.71■□□□□ 0.27
ITM2AO43736 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITM2AO43736 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITM2AO43736 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITM2AO43736 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ITM2AO43736 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.71■□□□□ 0.27
ITM2AO43736 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.71■□□□□ 0.27
ITM2AO43736 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ITM2AO43736 KLF4P1-201ENST00000412782 1185 ntBASIC16.71■□□□□ 0.27
ITM2AO43736 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.71■□□□□ 0.27
ITM2AO43736 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.71■□□□□ 0.27
ITM2AO43736 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.71■□□□□ 0.27
ITM2AO43736 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITM2AO43736 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.71■□□□□ 0.27
ITM2AO43736 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ITM2AO43736 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITM2AO43736 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ITM2AO43736 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms