Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP3O43295 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP3O43295 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC21.09■□□□□ 0.97
SRGAP3O43295 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SRGAP3O43295 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP3O43295 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SRGAP3O43295 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SRGAP3O43295 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SRGAP3O43295 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SRGAP3O43295 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SRGAP3O43295 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SRGAP3O43295 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SRGAP3O43295 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
SRGAP3O43295 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SRGAP3O43295 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.08■□□□□ 0.97
SRGAP3O43295 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SRGAP3O43295 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
SRGAP3O43295 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC21.08■□□□□ 0.97
SRGAP3O43295 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC21.08■□□□□ 0.97
SRGAP3O43295 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SRGAP3O43295 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC21.08■□□□□ 0.97
SRGAP3O43295 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC21.08■□□□□ 0.97
SRGAP3O43295 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21.08■□□□□ 0.97
SRGAP3O43295 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SRGAP3O43295 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SRGAP3O43295 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.08■□□□□ 0.97
SRGAP3O43295 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SRGAP3O43295 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.08■□□□□ 0.97
SRGAP3O43295 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.08■□□□□ 0.97
SRGAP3O43295 AC004877.2-201ENST00000623941 599 ntBASIC21.08■□□□□ 0.97
SRGAP3O43295 AC092865.6-201ENST00000642101 219 ntBASIC21.08■□□□□ 0.97
SRGAP3O43295 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SRGAP3O43295 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SRGAP3O43295 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC21.08■□□□□ 0.96
SRGAP3O43295 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
SRGAP3O43295 AL121761.2-201ENST00000598007 1648 ntBASIC21.07■□□□□ 0.96
SRGAP3O43295 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRGAP3O43295 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SRGAP3O43295 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRGAP3O43295 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRGAP3O43295 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SRGAP3O43295 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRGAP3O43295 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRGAP3O43295 LTB4R2-202ENST00000528054 3092 ntBASIC21.07■□□□□ 0.96
SRGAP3O43295 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRGAP3O43295 HR-201ENST00000312841 5351 ntTSL 5 BASIC21.07■□□□□ 0.96
SRGAP3O43295 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRGAP3O43295 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRGAP3O43295 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRGAP3O43295 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SRGAP3O43295 IMP4-203ENST00000409935 958 ntTSL 5 BASIC21.07■□□□□ 0.96
SRGAP3O43295 AC023274.1-201ENST00000418278 595 ntBASIC21.07■□□□□ 0.96
SRGAP3O43295 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC21.07■□□□□ 0.96
SRGAP3O43295 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
SRGAP3O43295 AL513480.1-201ENST00000451731 511 ntBASIC21.07■□□□□ 0.96
SRGAP3O43295 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SRGAP3O43295 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.07■□□□□ 0.96
SRGAP3O43295 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.07■□□□□ 0.96
SRGAP3O43295 MMP17-203ENST00000535004 719 ntTSL 3 BASIC21.07■□□□□ 0.96
SRGAP3O43295 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.07■□□□□ 0.96
SRGAP3O43295 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.07■□□□□ 0.96
SRGAP3O43295 BSG-214ENST00000614867 960 ntTSL 3 BASIC21.07■□□□□ 0.96
SRGAP3O43295 AL513190.1-201ENST00000621254 727 ntBASIC21.07■□□□□ 0.96
SRGAP3O43295 SLC22A20-204ENST00000530038 1673 ntBASIC21.07■□□□□ 0.96
SRGAP3O43295 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.07■□□□□ 0.96
SRGAP3O43295 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SRGAP3O43295 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC21.07■□□□□ 0.96
SRGAP3O43295 HARS-204ENST00000438307 1789 ntTSL 2 BASIC21.07■□□□□ 0.96
SRGAP3O43295 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC21.07■□□□□ 0.96
SRGAP3O43295 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC21.07■□□□□ 0.96
SRGAP3O43295 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SRGAP3O43295 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SRGAP3O43295 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SRGAP3O43295 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.07■□□□□ 0.96
SRGAP3O43295 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SRGAP3O43295 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRGAP3O43295 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRGAP3O43295 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SRGAP3O43295 TUBB8P12-201ENST00000308911 1335 ntBASIC21.06■□□□□ 0.96
SRGAP3O43295 TUBB7P-202ENST00000428444 1305 ntBASIC21.06■□□□□ 0.96
SRGAP3O43295 TUBB8P7-204ENST00000567960 1332 ntBASIC21.06■□□□□ 0.96
SRGAP3O43295 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC21.06■□□□□ 0.96
SRGAP3O43295 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC21.06■□□□□ 0.96
SRGAP3O43295 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC21.06■□□□□ 0.96
SRGAP3O43295 AC005915.1-201ENST00000624912 2018 ntBASIC21.06■□□□□ 0.96
SRGAP3O43295 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SRGAP3O43295 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SRGAP3O43295 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC21.06■□□□□ 0.96
SRGAP3O43295 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRGAP3O43295 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC21.06■□□□□ 0.96
SRGAP3O43295 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.06■□□□□ 0.96
SRGAP3O43295 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC21.06■□□□□ 0.96
SRGAP3O43295 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
SRGAP3O43295 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SRGAP3O43295 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SRGAP3O43295 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.06■□□□□ 0.96
SRGAP3O43295 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.06■□□□□ 0.96
SRGAP3O43295 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRGAP3O43295 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SRGAP3O43295 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms