Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 SPDYE21P-201ENST00000413323 827 ntBASIC16.98■□□□□ 0.31
PHGDHO43175 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 AL020989.1-201ENST00000422979 469 ntBASIC16.98■□□□□ 0.31
PHGDHO43175 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PHGDHO43175 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.98■□□□□ 0.31
PHGDHO43175 AC004817.3-201ENST00000602957 2129 ntBASIC16.98■□□□□ 0.31
PHGDHO43175 AC099336.1-202ENST00000602961 463 ntBASIC16.98■□□□□ 0.31
PHGDHO43175 AL358472.4-201ENST00000633140 710 ntBASIC16.98■□□□□ 0.31
PHGDHO43175 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PHGDHO43175 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PHGDHO43175 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PHGDHO43175 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.98■□□□□ 0.31
PHGDHO43175 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.98■□□□□ 0.31
PHGDHO43175 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.98■□□□□ 0.31
PHGDHO43175 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHGDHO43175 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.97■□□□□ 0.31
PHGDHO43175 AL645728.1-201ENST00000366221 2101 ntBASIC16.97■□□□□ 0.31
PHGDHO43175 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
PHGDHO43175 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PHGDHO43175 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PHGDHO43175 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PHGDHO43175 DOC2GP-204ENST00000639052 2548 ntBASIC16.97■□□□□ 0.31
PHGDHO43175 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.97■□□□□ 0.31
PHGDHO43175 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PHGDHO43175 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.97■□□□□ 0.31
PHGDHO43175 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.97■□□□□ 0.31
PHGDHO43175 NUS1P2-201ENST00000417358 873 ntBASIC16.97■□□□□ 0.31
PHGDHO43175 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.97■□□□□ 0.31
PHGDHO43175 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.97■□□□□ 0.31
PHGDHO43175 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.97■□□□□ 0.31
PHGDHO43175 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PHGDHO43175 AC092119.3-201ENST00000612618 583 ntBASIC16.97■□□□□ 0.31
PHGDHO43175 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PHGDHO43175 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.97■□□□□ 0.31
PHGDHO43175 AC046158.3-201ENST00000624947 2558 ntBASIC16.97■□□□□ 0.31
PHGDHO43175 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.97■□□□□ 0.31
PHGDHO43175 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PHGDHO43175 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PHGDHO43175 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.97■□□□□ 0.31
PHGDHO43175 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.96■□□□□ 0.31
PHGDHO43175 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
PHGDHO43175 AC008894.3-201ENST00000624324 3103 ntBASIC16.96■□□□□ 0.31
PHGDHO43175 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHGDHO43175 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHGDHO43175 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHGDHO43175 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHGDHO43175 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.96■□□□□ 0.31
PHGDHO43175 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PHGDHO43175 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PHGDHO43175 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PHGDHO43175 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHGDHO43175 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.96■□□□□ 0.31
PHGDHO43175 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHGDHO43175 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
PHGDHO43175 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.96■□□□□ 0.31
PHGDHO43175 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.96■□□□□ 0.31
PHGDHO43175 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHGDHO43175 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.96■□□□□ 0.31
PHGDHO43175 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.96■□□□□ 0.31
PHGDHO43175 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
PHGDHO43175 AC092329.2-201ENST00000598402 547 ntBASIC16.96■□□□□ 0.31
PHGDHO43175 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PHGDHO43175 AC069148.1-201ENST00000608741 768 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms