Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 MIR3180-1-201ENST00000580374 94 ntBASIC15.94■□□□□ 0.14
TRBV5-3A0A0A0MS03 MIR3180-3-201ENST00000584616 94 ntBASIC15.94■□□□□ 0.14
TRBV5-3A0A0A0MS03 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV5-3A0A0A0MS03 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV5-3A0A0A0MS03 GGT3P-204ENST00000453783 1664 ntBASIC15.94■□□□□ 0.14
TRBV5-3A0A0A0MS03 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
TRBV5-3A0A0A0MS03 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TRBV5-3A0A0A0MS03 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV5-3A0A0A0MS03 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
TRBV5-3A0A0A0MS03 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV5-3A0A0A0MS03 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV5-3A0A0A0MS03 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV5-3A0A0A0MS03 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.94■□□□□ 0.14
TRBV5-3A0A0A0MS03 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV5-3A0A0A0MS03 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TRBV5-3A0A0A0MS03 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV5-3A0A0A0MS03 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV5-3A0A0A0MS03 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV5-3A0A0A0MS03 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.94■□□□□ 0.14
TRBV5-3A0A0A0MS03 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV5-3A0A0A0MS03 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 AC092329.2-201ENST00000598402 547 ntBASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV5-3A0A0A0MS03 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 LINC00265-3P-201ENST00000447588 903 ntBASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms