Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC187A0A096LP49 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC187A0A096LP49 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCDC187A0A096LP49 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC187A0A096LP49 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.08■□□□□ 0.17
CCDC187A0A096LP49 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC187A0A096LP49 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC187A0A096LP49 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC187A0A096LP49 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC187A0A096LP49 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC187A0A096LP49 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 ABALON-201ENST00000629058 1903 ntBASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 AL031055.1-201ENST00000606362 631 ntBASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 AC012645.4-201ENST00000610691 1061 ntBASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 AC008267.7-201ENST00000624570 1194 ntBASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 AL354751.1-201ENST00000412768 1863 ntBASIC16.08■□□□□ 0.16
CCDC187A0A096LP49 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 ALG1L8P-201ENST00000533887 760 ntBASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 AC005225.4-201ENST00000557330 545 ntBASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 AC091167.2-201ENST00000579581 588 ntBASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 LINC02560-201ENST00000596379 459 ntBASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 AC008761.3-201ENST00000624803 892 ntBASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC187A0A096LP49 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 RNU1-129P-201ENST00000384064 167 ntBASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 UGT1A2P-201ENST00000454886 866 ntBASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 AP000842.3-202ENST00000569238 1080 ntBASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 MIR3909-201ENST00000579518 119 ntBASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms