Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 CXCL1P1-201ENST00000502804 216 ntBASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA9Q9Y5G4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGA9Q9Y5G4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGA9Q9Y5G4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.96■□□□□ 0.14
PCDHGA9Q9Y5G4 HTR7P1-202ENST00000624664 4411 ntBASIC15.96■□□□□ 0.14
PCDHGA9Q9Y5G4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGA9Q9Y5G4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.96■□□□□ 0.14
PCDHGA9Q9Y5G4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGA9Q9Y5G4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGA9Q9Y5G4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGA9Q9Y5G4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGA9Q9Y5G4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.96■□□□□ 0.14
PCDHGA9Q9Y5G4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGA9Q9Y5G4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 BCL2-203ENST00000589955 5011 ntBASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 PI4KAP1-204ENST00000612579 1703 ntBASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 AC068137.2-201ENST00000605408 478 ntBASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGA9Q9Y5G4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA9Q9Y5G4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA9Q9Y5G4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGA9Q9Y5G4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGA9Q9Y5G4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGA9Q9Y5G4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA9Q9Y5G4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA9Q9Y5G4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA9Q9Y5G4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA9Q9Y5G4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGA9Q9Y5G4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGA9Q9Y5G4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGA9Q9Y5G4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA9Q9Y5G4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGA9Q9Y5G4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA9Q9Y5G4 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.94■□□□□ 0.14
PCDHGA9Q9Y5G4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGA9Q9Y5G4 REXO1L3P-201ENST00000622202 1288 ntBASIC15.94■□□□□ 0.14
PCDHGA9Q9Y5G4 AC093028.1-201ENST00000622998 982 ntBASIC15.94■□□□□ 0.14
PCDHGA9Q9Y5G4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA9Q9Y5G4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms