Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB11Q9Y5F2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 ACTG1P4-201ENST00000425123 1122 ntBASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 KRT18P27-201ENST00000427733 1299 ntBASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 HMGN1P19-201ENST00000436976 333 ntBASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 AC108751.1-201ENST00000490852 363 ntBASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 AC064836.3-201ENST00000607928 673 ntBASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB11Q9Y5F2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 DNAJB3-202ENST00000449667 1266 ntBASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 SNHG9-202ENST00000564014 471 ntBASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB11Q9Y5F2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB11Q9Y5F2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHB11Q9Y5F2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB11Q9Y5F2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHB11Q9Y5F2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB11Q9Y5F2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB11Q9Y5F2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHB11Q9Y5F2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHB11Q9Y5F2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB11Q9Y5F2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB11Q9Y5F2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PCDHB11Q9Y5F2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB11Q9Y5F2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB11Q9Y5F2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PCDHB11Q9Y5F2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms