Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 AL021920.2-201ENST00000624828 1351 ntBASIC17.7■□□□□ 0.42
YIPF1Q9Y548 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 MIR3909-201ENST00000579518 119 ntBASIC17.7■□□□□ 0.42
YIPF1Q9Y548 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 NOC2LP2-201ENST00000407594 1944 ntBASIC17.7■□□□□ 0.42
YIPF1Q9Y548 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
YIPF1Q9Y548 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
YIPF1Q9Y548 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
YIPF1Q9Y548 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
YIPF1Q9Y548 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.69■□□□□ 0.42
YIPF1Q9Y548 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
YIPF1Q9Y548 CROCCP2-202ENST00000412962 2773 ntBASIC17.69■□□□□ 0.42
YIPF1Q9Y548 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
YIPF1Q9Y548 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
YIPF1Q9Y548 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
YIPF1Q9Y548 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
YIPF1Q9Y548 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
YIPF1Q9Y548 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
YIPF1Q9Y548 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.69■□□□□ 0.42
YIPF1Q9Y548 GPS2P2-201ENST00000430745 888 ntBASIC17.69■□□□□ 0.42
YIPF1Q9Y548 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.69■□□□□ 0.42
YIPF1Q9Y548 IGHV3-62-201ENST00000520057 340 ntBASIC17.69■□□□□ 0.42
YIPF1Q9Y548 AC015911.4-201ENST00000588022 1070 ntBASIC17.69■□□□□ 0.42
YIPF1Q9Y548 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
YIPF1Q9Y548 AC011467.4-201ENST00000594891 528 ntBASIC17.69■□□□□ 0.42
YIPF1Q9Y548 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.69■□□□□ 0.42
YIPF1Q9Y548 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.69■□□□□ 0.42
YIPF1Q9Y548 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.69■□□□□ 0.42
YIPF1Q9Y548 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
YIPF1Q9Y548 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
YIPF1Q9Y548 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.69■□□□□ 0.42
YIPF1Q9Y548 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.69■□□□□ 0.42
YIPF1Q9Y548 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
YIPF1Q9Y548 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 PMS2P4-201ENST00000412466 1052 ntBASIC17.68■□□□□ 0.42
YIPF1Q9Y548 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.68■□□□□ 0.42
YIPF1Q9Y548 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 LINC01225-203ENST00000563550 1244 ntBASIC17.68■□□□□ 0.42
YIPF1Q9Y548 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms