Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 AP006288.1-201ENST00000446065 395 ntBASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 URGCP-206ENST00000446958 365 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 SNHG9-202ENST00000564014 471 ntBASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 AL031432.2-201ENST00000566714 459 ntBASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 AL928711.1-201ENST00000570165 459 ntBASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 AC005412.3-201ENST00000580309 715 ntBASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 BSG-214ENST00000614867 960 ntTSL 3 BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
LINC00588Q9Y4M8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
LINC00588Q9Y4M8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
LINC00588Q9Y4M8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
LINC00588Q9Y4M8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC11.65□□□□□ -0.55
LINC00588Q9Y4M8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC11.65□□□□□ -0.55
LINC00588Q9Y4M8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
LINC00588Q9Y4M8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.55
LINC00588Q9Y4M8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
LINC00588Q9Y4M8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
LINC00588Q9Y4M8 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 FZD10-202ENST00000539839 3282 ntBASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 ACTG1P14-201ENST00000446382 1122 ntBASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 AC112191.1-201ENST00000523689 701 ntBASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 AP002472.1-201ENST00000577490 586 ntBASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 MIR4515-201ENST00000584082 81 ntBASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00588Q9Y4M8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00588Q9Y4M8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00588Q9Y4M8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00588Q9Y4M8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00588Q9Y4M8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms