Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGB4Q9UN71 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB4Q9UN71 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGB4Q9UN71 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGB4Q9UN71 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGB4Q9UN71 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB4Q9UN71 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PCDHGB4Q9UN71 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
PCDHGB4Q9UN71 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 MYCLP1-201ENST00000372451 1075 ntBASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 COX5BP2-201ENST00000392354 334 ntBASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 IGHV3-52-201ENST00000519770 353 ntBASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 AC006011.2-201ENST00000621313 1158 ntBASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 RNF216P1-203ENST00000404404 2427 ntBASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGB4Q9UN71 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 RNF126P1-202ENST00000569893 925 ntBASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 HYMAI.1-201ENST00000620949 238 ntBASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGB4Q9UN71 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGB4Q9UN71 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.58■□□□□ 0.25
PCDHGB4Q9UN71 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGB4Q9UN71 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.58■□□□□ 0.25
PCDHGB4Q9UN71 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGB4Q9UN71 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGB4Q9UN71 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PCDHGB4Q9UN71 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGB4Q9UN71 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGB4Q9UN71 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGB4Q9UN71 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDHGB4Q9UN71 AC063952.2-201ENST00000498792 1227 ntBASIC16.58■□□□□ 0.24
PCDHGB4Q9UN71 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms