Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC24.29■■□□□ 1.48
STAG3Q9UJ98 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
STAG3Q9UJ98 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
STAG3Q9UJ98 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
STAG3Q9UJ98 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
STAG3Q9UJ98 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
STAG3Q9UJ98 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
STAG3Q9UJ98 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
STAG3Q9UJ98 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
STAG3Q9UJ98 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
STAG3Q9UJ98 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
STAG3Q9UJ98 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
STAG3Q9UJ98 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC24.28■■□□□ 1.48
STAG3Q9UJ98 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
STAG3Q9UJ98 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC24.28■■□□□ 1.48
STAG3Q9UJ98 REEP4-207ENST00000523293 913 ntTSL 3 BASIC24.28■■□□□ 1.48
STAG3Q9UJ98 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC24.28■■□□□ 1.48
STAG3Q9UJ98 CDK4-206ENST00000549606 558 ntTSL 2 BASIC24.28■■□□□ 1.48
STAG3Q9UJ98 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC24.28■■□□□ 1.48
STAG3Q9UJ98 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC24.28■■□□□ 1.48
STAG3Q9UJ98 AC007967.4-201ENST00000614700 386 ntBASIC24.28■■□□□ 1.48
STAG3Q9UJ98 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
STAG3Q9UJ98 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
STAG3Q9UJ98 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
STAG3Q9UJ98 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
STAG3Q9UJ98 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC24.28■■□□□ 1.48
STAG3Q9UJ98 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
STAG3Q9UJ98 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
STAG3Q9UJ98 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
STAG3Q9UJ98 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
STAG3Q9UJ98 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
STAG3Q9UJ98 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC24.27■■□□□ 1.48
STAG3Q9UJ98 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC24.27■■□□□ 1.48
STAG3Q9UJ98 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
STAG3Q9UJ98 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
STAG3Q9UJ98 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC24.27■■□□□ 1.48
STAG3Q9UJ98 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC24.27■■□□□ 1.48
STAG3Q9UJ98 AC142381.1-201ENST00000426099 345 ntBASIC24.27■■□□□ 1.48
STAG3Q9UJ98 PTPA-220ENST00000436883 532 ntTSL 4 BASIC24.27■■□□□ 1.48
STAG3Q9UJ98 TMPRSS11CP-201ENST00000453277 683 ntBASIC24.27■■□□□ 1.48
STAG3Q9UJ98 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC24.27■■□□□ 1.48
STAG3Q9UJ98 AC105233.2-201ENST00000523697 349 ntBASIC24.27■■□□□ 1.48
STAG3Q9UJ98 AF228730.5-201ENST00000530288 346 ntBASIC24.27■■□□□ 1.48
STAG3Q9UJ98 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
STAG3Q9UJ98 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC24.27■■□□□ 1.48
STAG3Q9UJ98 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC24.27■■□□□ 1.48
STAG3Q9UJ98 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
STAG3Q9UJ98 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
STAG3Q9UJ98 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
STAG3Q9UJ98 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
STAG3Q9UJ98 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
STAG3Q9UJ98 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
STAG3Q9UJ98 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 SATB1-217ENST00000493952 626 ntTSL 3 BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 HARS-204ENST00000438307 1789 ntTSL 2 BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC24.26■■□□□ 1.47
STAG3Q9UJ98 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
STAG3Q9UJ98 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC24.25■■□□□ 1.47
STAG3Q9UJ98 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
STAG3Q9UJ98 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC24.25■■□□□ 1.47
STAG3Q9UJ98 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
STAG3Q9UJ98 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
STAG3Q9UJ98 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
STAG3Q9UJ98 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
STAG3Q9UJ98 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
STAG3Q9UJ98 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
STAG3Q9UJ98 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC24.25■■□□□ 1.47
STAG3Q9UJ98 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
STAG3Q9UJ98 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC24.25■■□□□ 1.47
STAG3Q9UJ98 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC24.25■■□□□ 1.47
STAG3Q9UJ98 HLA-V-204ENST00000476601 1289 ntBASIC24.25■■□□□ 1.47
STAG3Q9UJ98 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC24.25■■□□□ 1.47
STAG3Q9UJ98 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC24.25■■□□□ 1.47
STAG3Q9UJ98 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC24.25■■□□□ 1.47
STAG3Q9UJ98 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms