Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.64■□□□□ 0.09
LRFN1Q9P244 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.64■□□□□ 0.09
LRFN1Q9P244 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.64■□□□□ 0.09
LRFN1Q9P244 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.64■□□□□ 0.09
LRFN1Q9P244 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.64■□□□□ 0.09
LRFN1Q9P244 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.64■□□□□ 0.09
LRFN1Q9P244 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRFN1Q9P244 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.64■□□□□ 0.09
LRFN1Q9P244 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRFN1Q9P244 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRFN1Q9P244 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRFN1Q9P244 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.64■□□□□ 0.09
LRFN1Q9P244 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRFN1Q9P244 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRFN1Q9P244 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 AC016396.2-201ENST00000562575 1417 ntBASIC15.63■□□□□ 0.09
LRFN1Q9P244 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LRFN1Q9P244 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
LRFN1Q9P244 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.63■□□□□ 0.09
LRFN1Q9P244 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.63■□□□□ 0.09
LRFN1Q9P244 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.63■□□□□ 0.09
LRFN1Q9P244 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.63■□□□□ 0.09
LRFN1Q9P244 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.63■□□□□ 0.09
LRFN1Q9P244 AC068137.2-201ENST00000605408 478 ntBASIC15.63■□□□□ 0.09
LRFN1Q9P244 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.63■□□□□ 0.09
LRFN1Q9P244 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 PCDHB18P-201ENST00000524813 2368 ntBASIC15.63■□□□□ 0.09
LRFN1Q9P244 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.63■□□□□ 0.09
LRFN1Q9P244 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LRFN1Q9P244 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRFN1Q9P244 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.63■□□□□ 0.09
LRFN1Q9P244 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.63■□□□□ 0.09
LRFN1Q9P244 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
LRFN1Q9P244 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LRFN1Q9P244 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRFN1Q9P244 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.62■□□□□ 0.09
LRFN1Q9P244 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
LRFN1Q9P244 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
LRFN1Q9P244 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRFN1Q9P244 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRFN1Q9P244 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRFN1Q9P244 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRFN1Q9P244 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.62■□□□□ 0.09
LRFN1Q9P244 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRFN1Q9P244 AC254562.1-201ENST00000417586 456 ntBASIC15.62■□□□□ 0.09
LRFN1Q9P244 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.62■□□□□ 0.09
LRFN1Q9P244 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.62■□□□□ 0.09
LRFN1Q9P244 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.62■□□□□ 0.09
LRFN1Q9P244 ACTG1P14-201ENST00000446382 1122 ntBASIC15.62■□□□□ 0.09
LRFN1Q9P244 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.62■□□□□ 0.09
LRFN1Q9P244 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
LRFN1Q9P244 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.62■□□□□ 0.09
LRFN1Q9P244 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRFN1Q9P244 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.62■□□□□ 0.09
LRFN1Q9P244 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRFN1Q9P244 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.62■□□□□ 0.09
LRFN1Q9P244 AC091812.2-201ENST00000619081 385 ntBASIC15.62■□□□□ 0.09
LRFN1Q9P244 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.62■□□□□ 0.09
LRFN1Q9P244 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRFN1Q9P244 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRFN1Q9P244 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LRFN1Q9P244 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRFN1Q9P244 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRFN1Q9P244 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRFN1Q9P244 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRFN1Q9P244 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRFN1Q9P244 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
LRFN1Q9P244 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.62■□□□□ 0.09
LRFN1Q9P244 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.62■□□□□ 0.09
LRFN1Q9P244 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRFN1Q9P244 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.62■□□□□ 0.09
LRFN1Q9P244 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRFN1Q9P244 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRFN1Q9P244 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRFN1Q9P244 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.61■□□□□ 0.09
LRFN1Q9P244 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LRFN1Q9P244 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRFN1Q9P244 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.61■□□□□ 0.09
LRFN1Q9P244 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRFN1Q9P244 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms