Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 HCG4-201ENST00000418983 998 ntBASIC18.27■□□□□ 0.52
CNTN3Q9P232 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.27■□□□□ 0.52
CNTN3Q9P232 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
CNTN3Q9P232 MPDU1-223ENST00000582151 728 ntBASIC18.27■□□□□ 0.52
CNTN3Q9P232 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.27■□□□□ 0.52
CNTN3Q9P232 AP001160.2-201ENST00000596071 487 ntBASIC18.27■□□□□ 0.52
CNTN3Q9P232 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.27■□□□□ 0.52
CNTN3Q9P232 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNTN3Q9P232 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CNTN3Q9P232 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.27■□□□□ 0.52
CNTN3Q9P232 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNTN3Q9P232 AC012569.1-201ENST00000591191 1524 ntBASIC18.27■□□□□ 0.51
CNTN3Q9P232 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CNTN3Q9P232 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CNTN3Q9P232 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CNTN3Q9P232 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CNTN3Q9P232 PCDHA12-202ENST00000613593 2588 ntBASIC18.27■□□□□ 0.51
CNTN3Q9P232 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CNTN3Q9P232 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.27■□□□□ 0.51
CNTN3Q9P232 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.27■□□□□ 0.51
CNTN3Q9P232 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CNTN3Q9P232 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.26■□□□□ 0.51
CNTN3Q9P232 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.26■□□□□ 0.51
CNTN3Q9P232 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNTN3Q9P232 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.26■□□□□ 0.51
CNTN3Q9P232 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.26■□□□□ 0.51
CNTN3Q9P232 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.26■□□□□ 0.51
CNTN3Q9P232 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNTN3Q9P232 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNTN3Q9P232 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.26■□□□□ 0.51
CNTN3Q9P232 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CNTN3Q9P232 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNTN3Q9P232 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CNTN3Q9P232 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.26■□□□□ 0.51
CNTN3Q9P232 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
CNTN3Q9P232 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNTN3Q9P232 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.26■□□□□ 0.51
CNTN3Q9P232 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.26■□□□□ 0.51
CNTN3Q9P232 CEND1P1-201ENST00000451006 455 ntBASIC18.26■□□□□ 0.51
CNTN3Q9P232 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CNTN3Q9P232 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.26■□□□□ 0.51
CNTN3Q9P232 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.26■□□□□ 0.51
CNTN3Q9P232 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.26■□□□□ 0.51
CNTN3Q9P232 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.26■□□□□ 0.51
CNTN3Q9P232 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.26■□□□□ 0.51
CNTN3Q9P232 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNTN3Q9P232 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CNTN3Q9P232 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CNTN3Q9P232 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.26■□□□□ 0.51
CNTN3Q9P232 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.26■□□□□ 0.51
CNTN3Q9P232 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNTN3Q9P232 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNTN3Q9P232 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNTN3Q9P232 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CNTN3Q9P232 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNTN3Q9P232 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CNTN3Q9P232 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CNTN3Q9P232 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CNTN3Q9P232 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CNTN3Q9P232 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNTN3Q9P232 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CNTN3Q9P232 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CNTN3Q9P232 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.25■□□□□ 0.51
CNTN3Q9P232 DNAJB3-202ENST00000449667 1266 ntBASIC18.25■□□□□ 0.51
CNTN3Q9P232 AC112191.1-201ENST00000523689 701 ntBASIC18.25■□□□□ 0.51
CNTN3Q9P232 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
CNTN3Q9P232 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.25■□□□□ 0.51
CNTN3Q9P232 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.25■□□□□ 0.51
CNTN3Q9P232 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNTN3Q9P232 AC079781.4-201ENST00000641908 219 ntBASIC18.25■□□□□ 0.51
CNTN3Q9P232 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CNTN3Q9P232 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNTN3Q9P232 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CNTN3Q9P232 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNTN3Q9P232 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNTN3Q9P232 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNTN3Q9P232 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CNTN3Q9P232 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNTN3Q9P232 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNTN3Q9P232 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNTN3Q9P232 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNTN3Q9P232 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.25■□□□□ 0.51
CNTN3Q9P232 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNTN3Q9P232 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNTN3Q9P232 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CNTN3Q9P232 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CNTN3Q9P232 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CNTN3Q9P232 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNTN3Q9P232 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNTN3Q9P232 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.24■□□□□ 0.51
CNTN3Q9P232 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.24■□□□□ 0.51
CNTN3Q9P232 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNTN3Q9P232 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CNTN3Q9P232 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.24■□□□□ 0.51
CNTN3Q9P232 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNTN3Q9P232 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CNTN3Q9P232 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNTN3Q9P232 AC002056.1-201ENST00000395613 760 ntBASIC18.24■□□□□ 0.51
CNTN3Q9P232 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.24■□□□□ 0.51
CNTN3Q9P232 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms