Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
BLOC1S4Q9NUP1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 SLC22A20-204ENST00000530038 1673 ntBASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 UNC93B6-202ENST00000528242 690 ntBASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 MIR4492-201ENST00000581627 80 ntBASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 AC013467.2-201ENST00000605472 835 ntBASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 SNX33P1-201ENST00000592116 1762 ntBASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 BCL2-203ENST00000589955 5011 ntBASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
BLOC1S4Q9NUP1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
BLOC1S4Q9NUP1 AC006277.1-201ENST00000624348 1610 ntBASIC18.89■□□□□ 0.62
BLOC1S4Q9NUP1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms