Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 REST-210ENST00000638187 1334 ntTSL 5 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 AL157400.5-201ENST00000507624 621 ntBASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 AL031595.1-201ENST00000623969 4709 ntBASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 AL109954.1-202ENST00000564051 2148 ntBASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 INVS-201ENST00000262456 2968 ntTSL 5 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 AC007614.4-201ENST00000564048 1827 ntBASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC8.66□□□□□ -1.02
CDC42SE1Q9NRR8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 HLA-J-201ENST00000462773 1622 ntBASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 PTBP1P-201ENST00000554374 1601 ntBASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 KRT8P9-201ENST00000558927 1449 ntBASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 AC106818.1-201ENST00000623223 3242 ntBASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 POR-201ENST00000394893 2532 ntTSL 5 BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42SE1Q9NRR8 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms