Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 LINC01451-201ENST00000623792 534 ntBASIC17.64■□□□□ 0.41
HPS4Q9NQG7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 CROCCP1-201ENST00000426910 5675 ntBASIC17.63■□□□□ 0.41
HPS4Q9NQG7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 AL121761.2-201ENST00000598007 1648 ntBASIC17.63■□□□□ 0.41
HPS4Q9NQG7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 ADH5P3-201ENST00000433842 1137 ntBASIC17.63■□□□□ 0.41
HPS4Q9NQG7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS4Q9NQG7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.62■□□□□ 0.41
HPS4Q9NQG7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 AC129492.6-201ENST00000611383 1305 ntBASIC17.62■□□□□ 0.41
HPS4Q9NQG7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HPS4Q9NQG7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 LINC00304-203ENST00000565008 1864 ntBASIC17.61■□□□□ 0.41
HPS4Q9NQG7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 AC008764.6-201ENST00000595909 2069 ntBASIC17.61■□□□□ 0.41
HPS4Q9NQG7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HPS4Q9NQG7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms