Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 AKR1C7P-201ENST00000305623 895 ntBASIC17.62■□□□□ 0.41
PCDH9Q9HC56 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 AL450487.1-201ENST00000426799 995 ntBASIC17.62■□□□□ 0.41
PCDH9Q9HC56 SAPCD2P3-201ENST00000455031 850 ntBASIC17.62■□□□□ 0.41
PCDH9Q9HC56 AP002490.2-201ENST00000524791 560 ntBASIC17.62■□□□□ 0.41
PCDH9Q9HC56 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH9Q9HC56 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 PCDHB17P-201ENST00000539533 2393 ntBASIC17.61■□□□□ 0.41
PCDH9Q9HC56 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 DOC2GP-204ENST00000639052 2548 ntBASIC17.61■□□□□ 0.41
PCDH9Q9HC56 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 KRT126P-201ENST00000549467 1181 ntBASIC17.61■□□□□ 0.41
PCDH9Q9HC56 MTDHP3-201ENST00000594186 672 ntBASIC17.61■□□□□ 0.41
PCDH9Q9HC56 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 TUBB8P12-201ENST00000308911 1335 ntBASIC17.61■□□□□ 0.41
PCDH9Q9HC56 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 TUBB7P-202ENST00000428444 1305 ntBASIC17.61■□□□□ 0.41
PCDH9Q9HC56 TUBB8P7-204ENST00000567960 1332 ntBASIC17.61■□□□□ 0.41
PCDH9Q9HC56 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH9Q9HC56 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH9Q9HC56 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH9Q9HC56 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH9Q9HC56 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH9Q9HC56 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDH9Q9HC56 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PCDH9Q9HC56 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PCDH9Q9HC56 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDH9Q9HC56 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH9Q9HC56 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
PCDH9Q9HC56 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDH9Q9HC56 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
PCDH9Q9HC56 SPDYE21P-201ENST00000413323 827 ntBASIC17.6■□□□□ 0.41
PCDH9Q9HC56 AL020989.1-201ENST00000422979 469 ntBASIC17.6■□□□□ 0.41
PCDH9Q9HC56 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
PCDH9Q9HC56 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDH9Q9HC56 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH9Q9HC56 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH9Q9HC56 AC008608.2-201ENST00000606089 416 ntBASIC17.6■□□□□ 0.41
PCDH9Q9HC56 AL355877.3-201ENST00000622820 899 ntBASIC17.6■□□□□ 0.41
PCDH9Q9HC56 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
PCDH9Q9HC56 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH9Q9HC56 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH9Q9HC56 AC079776.2-201ENST00000641154 1609 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms