Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 AC009078.2-202ENST00000463353 338 ntBASIC14.94□□□□□ -0.02
CDH20Q9HBT6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 AC105339.3-201ENST00000560043 636 ntBASIC14.94□□□□□ -0.02
CDH20Q9HBT6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 AC004706.3-202ENST00000621574 984 ntBASIC14.94□□□□□ -0.02
CDH20Q9HBT6 AC008735.5-201ENST00000623544 497 ntBASIC14.94□□□□□ -0.02
CDH20Q9HBT6 AC148477.8-201ENST00000624298 468 ntBASIC14.94□□□□□ -0.02
CDH20Q9HBT6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 PP12613-201ENST00000424958 2230 ntBASIC14.94□□□□□ -0.02
CDH20Q9HBT6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 AC116353.5-201ENST00000638148 1699 ntBASIC14.93□□□□□ -0.02
CDH20Q9HBT6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 AC011270.2-201ENST00000624293 2550 ntBASIC14.93□□□□□ -0.02
CDH20Q9HBT6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 MRPL3P1-201ENST00000400109 1033 ntBASIC14.93□□□□□ -0.02
CDH20Q9HBT6 AC026396.1-201ENST00000419388 421 ntBASIC14.93□□□□□ -0.02
CDH20Q9HBT6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 FAM215A-202ENST00000632077 792 ntBASIC14.93□□□□□ -0.02
CDH20Q9HBT6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 EGFEM1P-202ENST00000431685 1563 ntBASIC14.93□□□□□ -0.02
CDH20Q9HBT6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.93□□□□□ -0.02
CDH20Q9HBT6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 PCDHA12-202ENST00000613593 2588 ntBASIC14.92□□□□□ -0.02
CDH20Q9HBT6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms