Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 ABCD1P5-201ENST00000445663 754 ntBASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
CCDC68Q9H2F9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CCDC68Q9H2F9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 SLC25A1P3-201ENST00000395415 828 ntBASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 HCG4P8-203ENST00000443049 980 ntBASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 AP000867.4-201ENST00000641616 219 ntBASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC68Q9H2F9 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 SPDYE21P-201ENST00000413323 827 ntBASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 MIR3652-201ENST00000579335 131 ntBASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC68Q9H2F9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms