Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UPK3BQ9BT76 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 CSF3-203ENST00000394148 622 ntTSL 3 BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 AP000347.1-202ENST00000435868 847 ntBASIC11.92□□□□□ -0.5
UPK3BQ9BT76 AC098831.1-202ENST00000438821 336 ntBASIC11.92□□□□□ -0.5
UPK3BQ9BT76 RPL13AP23-201ENST00000480739 586 ntBASIC11.92□□□□□ -0.5
UPK3BQ9BT76 AC092910.1-201ENST00000482027 1129 ntBASIC11.92□□□□□ -0.5
UPK3BQ9BT76 KRT18P58-201ENST00000527480 1120 ntBASIC11.92□□□□□ -0.5
UPK3BQ9BT76 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 AL356488.2-201ENST00000602755 427 ntBASIC11.92□□□□□ -0.5
UPK3BQ9BT76 AL139424.1-201ENST00000607572 797 ntBASIC11.92□□□□□ -0.5
UPK3BQ9BT76 NME4-212ENST00000621774 904 ntTSL 3 BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC11.92□□□□□ -0.5
UPK3BQ9BT76 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 AMT-250ENST00000637682 1823 ntTSL 5 BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 AC073621.1-201ENST00000392730 636 ntBASIC11.91□□□□□ -0.5
UPK3BQ9BT76 ACTG1P4-201ENST00000425123 1122 ntBASIC11.91□□□□□ -0.5
UPK3BQ9BT76 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 AC012640.2-201ENST00000561606 901 ntBASIC11.91□□□□□ -0.5
UPK3BQ9BT76 CYB561-217ENST00000582997 877 ntTSL 5 BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 CYGB-205ENST00000590175 830 ntTSL 3 BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 Z83851.2-201ENST00000609564 659 ntBASIC11.91□□□□□ -0.5
UPK3BQ9BT76 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UPK3BQ9BT76 AC117500.6-201ENST00000624871 588 ntBASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms