Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMSS1Q9BQ75 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 AL603756.1-201ENST00000606511 2163 ntBASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 HBZP1-201ENST00000354915 429 ntBASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 AL596275.1-201ENST00000423464 877 ntBASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 AL137013.1-201ENST00000432946 1228 ntBASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 AL390719.2-201ENST00000606993 987 ntBASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CMSS1Q9BQ75 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CMSS1Q9BQ75 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CMSS1Q9BQ75 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CMSS1Q9BQ75 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CMSS1Q9BQ75 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.62□□□□□ -0.07
CMSS1Q9BQ75 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CMSS1Q9BQ75 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CMSS1Q9BQ75 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms