Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC38A3Q99624 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC38A3Q99624 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC38A3Q99624 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC38A3Q99624 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC38A3Q99624 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC38A3Q99624 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC38A3Q99624 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC38A3Q99624 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC38A3Q99624 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
SLC38A3Q99624 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC38A3Q99624 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC38A3Q99624 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC38A3Q99624 CNN2P11-201ENST00000429351 262 ntBASIC16.5■□□□□ 0.23
SLC38A3Q99624 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC38A3Q99624 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC38A3Q99624 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.5■□□□□ 0.23
SLC38A3Q99624 AL031432.2-201ENST00000566714 459 ntBASIC16.5■□□□□ 0.23
SLC38A3Q99624 AL928711.1-201ENST00000570165 459 ntBASIC16.5■□□□□ 0.23
SLC38A3Q99624 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC38A3Q99624 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SLC38A3Q99624 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SLC38A3Q99624 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SLC38A3Q99624 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
SLC38A3Q99624 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC38A3Q99624 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SLC38A3Q99624 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC38A3Q99624 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC38A3Q99624 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SLC38A3Q99624 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC38A3Q99624 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC38A3Q99624 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC38A3Q99624 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC38A3Q99624 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC38A3Q99624 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC38A3Q99624 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC38A3Q99624 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC38A3Q99624 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC38A3Q99624 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SLC38A3Q99624 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SLC38A3Q99624 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A3Q99624 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A3Q99624 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SLC38A3Q99624 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC38A3Q99624 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A3Q99624 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A3Q99624 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A3Q99624 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC38A3Q99624 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A3Q99624 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A3Q99624 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A3Q99624 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A3Q99624 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC38A3Q99624 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A3Q99624 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.49■□□□□ 0.23
SLC38A3Q99624 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC38A3Q99624 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC38A3Q99624 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A3Q99624 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC38A3Q99624 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC38A3Q99624 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SLC38A3Q99624 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A3Q99624 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SLC38A3Q99624 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
SLC38A3Q99624 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SLC38A3Q99624 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SLC38A3Q99624 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A3Q99624 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SLC38A3Q99624 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC38A3Q99624 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A3Q99624 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A3Q99624 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A3Q99624 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A3Q99624 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A3Q99624 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC38A3Q99624 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC38A3Q99624 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A3Q99624 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC38A3Q99624 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SLC38A3Q99624 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SLC38A3Q99624 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A3Q99624 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A3Q99624 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A3Q99624 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A3Q99624 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SLC38A3Q99624 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.48■□□□□ 0.23
SLC38A3Q99624 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC38A3Q99624 PMS2P2-201ENST00000425039 1128 ntBASIC16.48■□□□□ 0.23
SLC38A3Q99624 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A3Q99624 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SLC38A3Q99624 AC112191.1-201ENST00000523689 701 ntBASIC16.48■□□□□ 0.23
SLC38A3Q99624 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC38A3Q99624 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A3Q99624 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A3Q99624 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC38A3Q99624 AL645728.2-201ENST00000641974 660 ntBASIC16.48■□□□□ 0.23
SLC38A3Q99624 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A3Q99624 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC38A3Q99624 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A3Q99624 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms