Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PHOX2BQ99453 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PHOX2BQ99453 AC100757.3-201ENST00000622361 1406 ntBASIC17.23■□□□□ 0.35
PHOX2BQ99453 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHOX2BQ99453 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHOX2BQ99453 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHOX2BQ99453 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHOX2BQ99453 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHOX2BQ99453 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.23■□□□□ 0.35
PHOX2BQ99453 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PHOX2BQ99453 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PHOX2BQ99453 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PHOX2BQ99453 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.23■□□□□ 0.35
PHOX2BQ99453 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.23■□□□□ 0.35
PHOX2BQ99453 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.23■□□□□ 0.35
PHOX2BQ99453 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.23■□□□□ 0.35
PHOX2BQ99453 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.23■□□□□ 0.35
PHOX2BQ99453 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHOX2BQ99453 AC003101.2-201ENST00000612557 442 ntBASIC17.23■□□□□ 0.35
PHOX2BQ99453 AL590560.3-201ENST00000623350 461 ntBASIC17.23■□□□□ 0.35
PHOX2BQ99453 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.23■□□□□ 0.35
PHOX2BQ99453 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHOX2BQ99453 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PHOX2BQ99453 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHOX2BQ99453 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.23■□□□□ 0.35
PHOX2BQ99453 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
PHOX2BQ99453 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
PHOX2BQ99453 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHOX2BQ99453 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHOX2BQ99453 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHOX2BQ99453 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PHOX2BQ99453 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHOX2BQ99453 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
PHOX2BQ99453 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.22■□□□□ 0.35
PHOX2BQ99453 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.22■□□□□ 0.35
PHOX2BQ99453 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHOX2BQ99453 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHOX2BQ99453 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHOX2BQ99453 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.22■□□□□ 0.35
PHOX2BQ99453 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.22■□□□□ 0.35
PHOX2BQ99453 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.22■□□□□ 0.35
PHOX2BQ99453 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHOX2BQ99453 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHOX2BQ99453 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHOX2BQ99453 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHOX2BQ99453 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PHOX2BQ99453 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PHOX2BQ99453 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.22■□□□□ 0.35
PHOX2BQ99453 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.22■□□□□ 0.35
PHOX2BQ99453 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.22■□□□□ 0.35
PHOX2BQ99453 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.22■□□□□ 0.35
PHOX2BQ99453 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PHOX2BQ99453 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.22■□□□□ 0.35
PHOX2BQ99453 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.22■□□□□ 0.35
PHOX2BQ99453 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.22■□□□□ 0.35
PHOX2BQ99453 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.22■□□□□ 0.35
PHOX2BQ99453 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHOX2BQ99453 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
PHOX2BQ99453 AC022144.1-201ENST00000602255 1580 ntBASIC17.22■□□□□ 0.35
PHOX2BQ99453 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHOX2BQ99453 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHOX2BQ99453 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.22■□□□□ 0.35
PHOX2BQ99453 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHOX2BQ99453 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.22■□□□□ 0.35
PHOX2BQ99453 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.22■□□□□ 0.35
PHOX2BQ99453 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHOX2BQ99453 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHOX2BQ99453 UXT-AS1-201ENST00000590504 1525 ntBASIC17.21■□□□□ 0.35
PHOX2BQ99453 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.21■□□□□ 0.35
PHOX2BQ99453 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.21■□□□□ 0.35
PHOX2BQ99453 AC126763.1-201ENST00000552015 2118 ntBASIC17.21■□□□□ 0.35
PHOX2BQ99453 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHOX2BQ99453 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHOX2BQ99453 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHOX2BQ99453 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PHOX2BQ99453 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PHOX2BQ99453 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PHOX2BQ99453 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PHOX2BQ99453 ELK2AP-201ENST00000392510 1007 ntBASIC17.21■□□□□ 0.35
PHOX2BQ99453 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHOX2BQ99453 DGCR5-201ENST00000399539 862 ntBASIC17.21■□□□□ 0.35
PHOX2BQ99453 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.21■□□□□ 0.35
PHOX2BQ99453 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PHOX2BQ99453 KLF4P1-201ENST00000412782 1185 ntBASIC17.21■□□□□ 0.35
PHOX2BQ99453 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PHOX2BQ99453 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PHOX2BQ99453 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.21■□□□□ 0.35
PHOX2BQ99453 API5-211ENST00000534695 560 ntTSL 5 BASIC17.21■□□□□ 0.35
PHOX2BQ99453 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PHOX2BQ99453 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.21■□□□□ 0.35
PHOX2BQ99453 KRT8P23-201ENST00000560090 1207 ntBASIC17.21■□□□□ 0.35
PHOX2BQ99453 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.21■□□□□ 0.35
PHOX2BQ99453 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.21■□□□□ 0.35
PHOX2BQ99453 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC17.21■□□□□ 0.35
PHOX2BQ99453 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
PHOX2BQ99453 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PHOX2BQ99453 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHOX2BQ99453 ANO7L1-203ENST00000602586 1720 ntBASIC17.21■□□□□ 0.35
PHOX2BQ99453 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
PHOX2BQ99453 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms