Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPENQ96T58 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPENQ96T58 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPENQ96T58 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPENQ96T58 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
SPENQ96T58 IGHV3-71-201ENST00000523324 359 ntBASIC15.18■□□□□ 0.02
SPENQ96T58 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SPENQ96T58 AC073439.1-201ENST00000624121 1774 ntBASIC15.18■□□□□ 0.02
SPENQ96T58 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SPENQ96T58 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPENQ96T58 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.18■□□□□ 0.02
SPENQ96T58 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SPENQ96T58 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.18■□□□□ 0.02
SPENQ96T58 MYCLP1-201ENST00000372451 1075 ntBASIC15.18■□□□□ 0.02
SPENQ96T58 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.18■□□□□ 0.02
SPENQ96T58 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.18■□□□□ 0.02
SPENQ96T58 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.18■□□□□ 0.02
SPENQ96T58 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.18■□□□□ 0.02
SPENQ96T58 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPENQ96T58 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.18■□□□□ 0.02
SPENQ96T58 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.18■□□□□ 0.02
SPENQ96T58 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.18■□□□□ 0.02
SPENQ96T58 AC140912.1-201ENST00000577171 1054 ntBASIC15.18■□□□□ 0.02
SPENQ96T58 AC008494.3-201ENST00000606615 944 ntBASIC15.18■□□□□ 0.02
SPENQ96T58 RPSAP52-203ENST00000622976 1023 ntBASIC15.18■□□□□ 0.02
SPENQ96T58 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SPENQ96T58 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SPENQ96T58 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPENQ96T58 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPENQ96T58 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPENQ96T58 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPENQ96T58 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPENQ96T58 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPENQ96T58 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SPENQ96T58 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.18■□□□□ 0.02
SPENQ96T58 SNX29P1-201ENST00000548357 1007 ntBASIC15.18■□□□□ 0.02
SPENQ96T58 AC132938.2-201ENST00000579188 680 ntBASIC15.18■□□□□ 0.02
SPENQ96T58 AL591163.1-201ENST00000641757 987 ntBASIC15.18■□□□□ 0.02
SPENQ96T58 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPENQ96T58 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SPENQ96T58 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SPENQ96T58 AC106820.2-201ENST00000563775 3264 ntBASIC15.17■□□□□ 0.02
SPENQ96T58 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPENQ96T58 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SPENQ96T58 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPENQ96T58 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.17■□□□□ 0.02
SPENQ96T58 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SPENQ96T58 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.17■□□□□ 0.02
SPENQ96T58 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SPENQ96T58 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SPENQ96T58 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.17■□□□□ 0.02
SPENQ96T58 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPENQ96T58 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.17■□□□□ 0.02
SPENQ96T58 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
SPENQ96T58 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.17■□□□□ 0.02
SPENQ96T58 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPENQ96T58 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPENQ96T58 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.17■□□□□ 0.02
SPENQ96T58 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SPENQ96T58 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SPENQ96T58 AC112492.5-201ENST00000421897 457 ntBASIC15.17■□□□□ 0.02
SPENQ96T58 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.17■□□□□ 0.02
SPENQ96T58 AC027369.6-201ENST00000525520 931 ntBASIC15.17■□□□□ 0.02
SPENQ96T58 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.17■□□□□ 0.02
SPENQ96T58 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.17■□□□□ 0.02
SPENQ96T58 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.17■□□□□ 0.02
SPENQ96T58 LINC00895-201ENST00000629028 1637 ntBASIC15.17■□□□□ 0.02
SPENQ96T58 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPENQ96T58 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.17■□□□□ 0.02
SPENQ96T58 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SPENQ96T58 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SPENQ96T58 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.17■□□□□ 0.02
SPENQ96T58 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.16■□□□□ 0.02
SPENQ96T58 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.16■□□□□ 0.02
SPENQ96T58 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SPENQ96T58 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.16■□□□□ 0.02
SPENQ96T58 WASH4P-201ENST00000564273 1246 ntBASIC15.16■□□□□ 0.02
SPENQ96T58 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SPENQ96T58 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.16■□□□□ 0.02
SPENQ96T58 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.16■□□□□ 0.02
SPENQ96T58 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SPENQ96T58 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.16■□□□□ 0.02
SPENQ96T58 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
SPENQ96T58 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SPENQ96T58 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.16■□□□□ 0.02
SPENQ96T58 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.16■□□□□ 0.02
SPENQ96T58 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.16■□□□□ 0.02
SPENQ96T58 AC008267.7-201ENST00000624570 1194 ntBASIC15.16■□□□□ 0.02
SPENQ96T58 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SPENQ96T58 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SPENQ96T58 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SPENQ96T58 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SPENQ96T58 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
SPENQ96T58 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.16■□□□□ 0.02
SPENQ96T58 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SPENQ96T58 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SPENQ96T58 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SPENQ96T58 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SPENQ96T58 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SPENQ96T58 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms