Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZNF48Q96MX3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 AC046185.3-201ENST00000623228 1824 ntBASIC13.87□□□□□ -0.19
ZNF48Q96MX3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 FER1L4-210ENST00000615531 5998 ntBASIC13.87□□□□□ -0.19
ZNF48Q96MX3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 CYMP-203ENST00000474680 1263 ntBASIC13.87□□□□□ -0.19
ZNF48Q96MX3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 AC091812.2-201ENST00000619081 385 ntBASIC13.87□□□□□ -0.19
ZNF48Q96MX3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.87□□□□□ -0.19
ZNF48Q96MX3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 AL645608.8-201ENST00000606034 2086 ntBASIC13.86□□□□□ -0.19
ZNF48Q96MX3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 AP002472.1-201ENST00000577490 586 ntBASIC13.86□□□□□ -0.19
ZNF48Q96MX3 LINC02084-201ENST00000606069 1096 ntBASIC13.86□□□□□ -0.19
ZNF48Q96MX3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF48Q96MX3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms