Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 AL592309.1-201ENST00000443127 649 ntBASIC19.77■□□□□ 0.76
CCDC17Q96LX7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 AC093520.2-201ENST00000561830 333 ntBASIC19.77■□□□□ 0.76
CCDC17Q96LX7 CYP2A7P1-201ENST00000595391 815 ntBASIC19.77■□□□□ 0.76
CCDC17Q96LX7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC17Q96LX7 AC108860.2-201ENST00000562760 2183 ntBASIC19.77■□□□□ 0.75
CCDC17Q96LX7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC17Q96LX7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.77■□□□□ 0.75
CCDC17Q96LX7 WASH6P-202ENST00000359512 1437 ntBASIC19.76■□□□□ 0.75
CCDC17Q96LX7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 AC005237.2-201ENST00000434368 219 ntBASIC19.76■□□□□ 0.75
CCDC17Q96LX7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 AC009093.7-201ENST00000623853 1223 ntBASIC19.76■□□□□ 0.75
CCDC17Q96LX7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC17Q96LX7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 CYMP-203ENST00000474680 1263 ntBASIC19.75■□□□□ 0.75
CCDC17Q96LX7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 AC004449.1-201ENST00000564240 433 ntBASIC19.75■□□□□ 0.75
CCDC17Q96LX7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC17Q96LX7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms