Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.35■□□□□ 0.05
PTP4A1Q93096 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.35■□□□□ 0.05
PTP4A1Q93096 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTP4A1Q93096 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PTP4A1Q93096 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTP4A1Q93096 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.35■□□□□ 0.05
PTP4A1Q93096 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTP4A1Q93096 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.35■□□□□ 0.05
PTP4A1Q93096 LINC00554-201ENST00000564841 3011 ntBASIC15.35■□□□□ 0.05
PTP4A1Q93096 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTP4A1Q93096 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.35■□□□□ 0.05
PTP4A1Q93096 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
PTP4A1Q93096 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTP4A1Q93096 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
PTP4A1Q93096 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.34■□□□□ 0.05
PTP4A1Q93096 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
PTP4A1Q93096 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
PTP4A1Q93096 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PTP4A1Q93096 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
PTP4A1Q93096 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.34■□□□□ 0.05
PTP4A1Q93096 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 HLA-A-202ENST00000376806 1854 ntBASIC15.34■□□□□ 0.05
PTP4A1Q93096 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 CYP2T1P-202ENST00000641596 2535 ntBASIC15.34■□□□□ 0.05
PTP4A1Q93096 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.34■□□□□ 0.05
PTP4A1Q93096 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.34■□□□□ 0.05
PTP4A1Q93096 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
PTP4A1Q93096 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.34■□□□□ 0.05
PTP4A1Q93096 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.34■□□□□ 0.05
PTP4A1Q93096 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.34■□□□□ 0.05
PTP4A1Q93096 AP005901.3-202ENST00000581653 237 ntBASIC15.34■□□□□ 0.05
PTP4A1Q93096 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.34■□□□□ 0.05
PTP4A1Q93096 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.34■□□□□ 0.05
PTP4A1Q93096 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.34■□□□□ 0.05
PTP4A1Q93096 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
PTP4A1Q93096 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.34■□□□□ 0.05
PTP4A1Q93096 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.34■□□□□ 0.05
PTP4A1Q93096 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.34■□□□□ 0.05
PTP4A1Q93096 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
PTP4A1Q93096 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTP4A1Q93096 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
PTP4A1Q93096 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTP4A1Q93096 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
PTP4A1Q93096 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTP4A1Q93096 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PTP4A1Q93096 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
PTP4A1Q93096 AL136379.1-201ENST00000623471 2642 ntBASIC15.33■□□□□ 0.05
PTP4A1Q93096 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTP4A1Q93096 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
PTP4A1Q93096 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTP4A1Q93096 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.33■□□□□ 0.05
PTP4A1Q93096 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.33■□□□□ 0.05
PTP4A1Q93096 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.33■□□□□ 0.05
PTP4A1Q93096 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PTP4A1Q93096 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 DRAXINP1-201ENST00000437611 948 ntBASIC15.33■□□□□ 0.04
PTP4A1Q93096 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms