Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 AC011840.4-201ENST00000578471 627 ntBASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 AC016734.2-201ENST00000624325 1377 ntBASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 AC026691.1-201ENST00000602502 2017 ntBASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 TSSC2-201ENST00000450217 709 ntBASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 AL353801.3-201ENST00000609898 542 ntBASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 AL358472.4-201ENST00000633140 710 ntBASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.4□□□□□ -0.1
RTN4IP1Q8WWV3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
RTN4IP1Q8WWV3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 AC096633.1-201ENST00000422446 749 ntBASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 VENTXP7-201ENST00000475503 772 ntBASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 AC091076.1-201ENST00000610741 619 ntBASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 PCDHB17P-201ENST00000539533 2393 ntBASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 AC092068.3-201ENST00000587894 2016 ntBASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 AC097374.2-201ENST00000618617 1306 ntBASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTN4IP1Q8WWV3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms