Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 HLA-J-202ENST00000469281 1241 ntBASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 AL136038.4-201ENST00000603606 1261 ntBASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.98■□□□□ 0.31
CKAP2Q8WWK9 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 AL135999.2-201ENST00000622438 1686 ntBASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 AP000523.1-201ENST00000398242 1049 ntBASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 MIR1238-201ENST00000408483 83 ntBASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 AC034232.1-201ENST00000506026 1064 ntBASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKAP2Q8WWK9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 AC128688.1-201ENST00000487626 519 ntBASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.96■□□□□ 0.31
CKAP2Q8WWK9 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.96■□□□□ 0.3
CKAP2Q8WWK9 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CKAP2Q8WWK9 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.96■□□□□ 0.3
CKAP2Q8WWK9 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.96■□□□□ 0.3
CKAP2Q8WWK9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CKAP2Q8WWK9 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CKAP2Q8WWK9 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CKAP2Q8WWK9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.96■□□□□ 0.3
CKAP2Q8WWK9 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CKAP2Q8WWK9 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.95■□□□□ 0.3
CKAP2Q8WWK9 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CKAP2Q8WWK9 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CKAP2Q8WWK9 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.95■□□□□ 0.3
CKAP2Q8WWK9 AL049757.1-201ENST00000616842 1596 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms