Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 5S_rRNA.22-201ENST00000614916 106 ntBASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 AC006538.1-201ENST00000567905 1585 ntBASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 FRMD8P1-201ENST00000440433 1524 ntBASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 MIR5189-201ENST00000577370 114 ntBASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 PDIA3P1-201ENST00000471856 1510 ntBASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ALMS1Q8TCU4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 AL353705.2-201ENST00000428243 662 ntBASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 AC092337.1-201ENST00000568699 1129 ntBASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 SRD5A3P1-201ENST00000603021 949 ntBASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 AC093503.3-201ENST00000624917 2352 ntBASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 HLA-H-201ENST00000383620 1096 ntBASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 TPRX2P-201ENST00000535362 881 ntBASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 AC244093.1-201ENST00000610837 814 ntBASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC11.28□□□□□ -0.6
ALMS1Q8TCU4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
ALMS1Q8TCU4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
ALMS1Q8TCU4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms