Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.64■□□□□ 0.74
CCDC148Q8NFR7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC148Q8NFR7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CCDC148Q8NFR7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CCDC148Q8NFR7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC148Q8NFR7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC148Q8NFR7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC148Q8NFR7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC148Q8NFR7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC148Q8NFR7 AC079776.4-201ENST00000511039 504 ntBASIC19.64■□□□□ 0.73
CCDC148Q8NFR7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
CCDC148Q8NFR7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC148Q8NFR7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC148Q8NFR7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC148Q8NFR7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC148Q8NFR7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC148Q8NFR7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC148Q8NFR7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC148Q8NFR7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC148Q8NFR7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC148Q8NFR7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC148Q8NFR7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CCDC148Q8NFR7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC148Q8NFR7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC148Q8NFR7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC148Q8NFR7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC148Q8NFR7 OR6D1P-203ENST00000641209 4860 ntBASIC19.64■□□□□ 0.73
CCDC148Q8NFR7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 AC060834.1-201ENST00000443027 2032 ntBASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 AC087163.2-201ENST00000457299 853 ntBASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC148Q8NFR7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 IGHV3-22-201ENST00000520721 359 ntBASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC148Q8NFR7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms