Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF439Q8NDP4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
ZNF439Q8NDP4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.18□□□□□ -0.14
ZNF439Q8NDP4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ZNF439Q8NDP4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF439Q8NDP4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
ZNF439Q8NDP4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ZNF439Q8NDP4 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF439Q8NDP4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF439Q8NDP4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.18□□□□□ -0.14
ZNF439Q8NDP4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF439Q8NDP4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF439Q8NDP4 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF439Q8NDP4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF439Q8NDP4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.18□□□□□ -0.14
ZNF439Q8NDP4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF439Q8NDP4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF439Q8NDP4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 EGFEM1P-202ENST00000431685 1563 ntBASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 AC148477.5-201ENST00000625164 1645 ntBASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 SPDYE21P-201ENST00000413323 827 ntBASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 UPK3BP1-201ENST00000428678 509 ntBASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 AC073592.4-201ENST00000623827 446 ntBASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 MIR600HG-201ENST00000449175 5984 ntBASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF439Q8NDP4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 SIGLEC16-201ENST00000599858 1437 ntBASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 KRT16P4-201ENST00000453883 522 ntBASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 AC138894.3-201ENST00000603787 634 ntBASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF439Q8NDP4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms