Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 LYSMD4-203ENST00000378904 2122 ntBASIC15.86■□□□□ 0.13
BEST3Q8N1M1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
BEST3Q8N1M1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
BEST3Q8N1M1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BEST3Q8N1M1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
BEST3Q8N1M1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
BEST3Q8N1M1 AC134043.2-201ENST00000624206 2238 ntBASIC15.84■□□□□ 0.13
BEST3Q8N1M1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 MCCD1P2-201ENST00000423228 335 ntBASIC15.84■□□□□ 0.13
BEST3Q8N1M1 RPS8P6-201ENST00000426177 609 ntBASIC15.84■□□□□ 0.13
BEST3Q8N1M1 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST3Q8N1M1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
BEST3Q8N1M1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
BEST3Q8N1M1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.83■□□□□ 0.13
BEST3Q8N1M1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
BEST3Q8N1M1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
BEST3Q8N1M1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 AC124067.4-201ENST00000519691 2379 ntBASIC15.83■□□□□ 0.12
BEST3Q8N1M1 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.83■□□□□ 0.12
BEST3Q8N1M1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 AC004967.1-201ENST00000453589 447 ntBASIC15.83■□□□□ 0.12
BEST3Q8N1M1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.83■□□□□ 0.12
BEST3Q8N1M1 AC096734.2-201ENST00000562054 433 ntBASIC15.83■□□□□ 0.12
BEST3Q8N1M1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms