Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 AC140878.1-201ENST00000565277 250 ntBASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 AL009183.1-201ENST00000603760 355 ntBASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 AC012569.1-201ENST00000591191 1524 ntBASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 LINC01225-203ENST00000563550 1244 ntBASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 AC012645.4-201ENST00000610691 1061 ntBASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 LINC01451-201ENST00000623792 534 ntBASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TMEFF1Q8IYR6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 SPDYE14P-201ENST00000442619 822 ntBASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 AL512638.1-201ENST00000457493 794 ntBASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 AC005412.3-201ENST00000580309 715 ntBASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 LINC02560-201ENST00000596379 459 ntBASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms