Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
UBR1Q8IWV7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
UBR1Q8IWV7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBR1Q8IWV7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBR1Q8IWV7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC23.83■■□□□ 1.41
UBR1Q8IWV7 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBR1Q8IWV7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBR1Q8IWV7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
UBR1Q8IWV7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC23.83■■□□□ 1.41
UBR1Q8IWV7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC23.83■■□□□ 1.41
UBR1Q8IWV7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC23.83■■□□□ 1.41
UBR1Q8IWV7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBR1Q8IWV7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC23.83■■□□□ 1.41
UBR1Q8IWV7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
UBR1Q8IWV7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC23.83■■□□□ 1.41
UBR1Q8IWV7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
UBR1Q8IWV7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC23.83■■□□□ 1.4
UBR1Q8IWV7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC23.83■■□□□ 1.4
UBR1Q8IWV7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC23.83■■□□□ 1.4
UBR1Q8IWV7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBR1Q8IWV7 AL021920.2-201ENST00000624828 1351 ntBASIC23.82■■□□□ 1.4
UBR1Q8IWV7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC23.82■■□□□ 1.4
UBR1Q8IWV7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC23.82■■□□□ 1.4
UBR1Q8IWV7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
UBR1Q8IWV7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
UBR1Q8IWV7 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC23.82■■□□□ 1.4
UBR1Q8IWV7 RPSAP52-203ENST00000622976 1023 ntBASIC23.82■■□□□ 1.4
UBR1Q8IWV7 COX11-210ENST00000639671 696 ntBASIC23.82■■□□□ 1.4
UBR1Q8IWV7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC23.82■■□□□ 1.4
UBR1Q8IWV7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC23.82■■□□□ 1.4
UBR1Q8IWV7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBR1Q8IWV7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC23.82■■□□□ 1.4
UBR1Q8IWV7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC23.82■■□□□ 1.4
UBR1Q8IWV7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC23.82■■□□□ 1.4
UBR1Q8IWV7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBR1Q8IWV7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC23.81■■□□□ 1.4
UBR1Q8IWV7 AL589987.1-201ENST00000453380 819 ntBASIC23.81■■□□□ 1.4
UBR1Q8IWV7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC23.81■■□□□ 1.4
UBR1Q8IWV7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
UBR1Q8IWV7 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBR1Q8IWV7 AP005482.1-201ENST00000563722 1273 ntBASIC23.81■■□□□ 1.4
UBR1Q8IWV7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC23.81■■□□□ 1.4
UBR1Q8IWV7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
UBR1Q8IWV7 AP000974.1-201ENST00000623909 2387 ntBASIC23.81■■□□□ 1.4
UBR1Q8IWV7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBR1Q8IWV7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBR1Q8IWV7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC23.81■■□□□ 1.4
UBR1Q8IWV7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBR1Q8IWV7 REXO1L6P-201ENST00000603433 1515 ntBASIC23.81■■□□□ 1.4
UBR1Q8IWV7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC23.81■■□□□ 1.4
UBR1Q8IWV7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBR1Q8IWV7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC23.81■■□□□ 1.4
UBR1Q8IWV7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC23.81■■□□□ 1.4
UBR1Q8IWV7 PACS1-203ENST00000524815 628 ntTSL 4 BASIC23.81■■□□□ 1.4
UBR1Q8IWV7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC23.81■■□□□ 1.4
UBR1Q8IWV7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
UBR1Q8IWV7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
UBR1Q8IWV7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBR1Q8IWV7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 KRT8P12-202ENST00000472924 1397 ntBASIC23.8■■□□□ 1.4
UBR1Q8IWV7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 AC007389.4-201ENST00000454674 793 ntBASIC23.8■■□□□ 1.4
UBR1Q8IWV7 TPRX2P-201ENST00000535362 881 ntBASIC23.8■■□□□ 1.4
UBR1Q8IWV7 AC092552.1-201ENST00000547243 906 ntBASIC23.8■■□□□ 1.4
UBR1Q8IWV7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 MAX-210ENST00000555419 765 ntTSL 5 BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 AC116353.5-201ENST00000638148 1699 ntBASIC23.8■■□□□ 1.4
UBR1Q8IWV7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC23.8■■□□□ 1.4
UBR1Q8IWV7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
UBR1Q8IWV7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
UBR1Q8IWV7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC23.79■■□□□ 1.4
UBR1Q8IWV7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC23.79■■□□□ 1.4
UBR1Q8IWV7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
UBR1Q8IWV7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC23.79■■□□□ 1.4
UBR1Q8IWV7 AC093525.9-201ENST00000624961 1746 ntBASIC23.79■■□□□ 1.4
UBR1Q8IWV7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
UBR1Q8IWV7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
UBR1Q8IWV7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
UBR1Q8IWV7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC23.79■■□□□ 1.4
UBR1Q8IWV7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms