Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 PCDHB17P-201ENST00000539533 2393 ntBASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 DUX4L17-201ENST00000557360 1267 ntBASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 AL356309.3-201ENST00000624132 1934 ntBASIC17.53■□□□□ 0.4
CDKL3Q8IVW4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 NKAPP1-205ENST00000585790 367 ntBASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL3Q8IVW4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDKL3Q8IVW4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 AL590787.1-201ENST00000568856 1315 ntBASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 KRT18P31-201ENST00000506277 1292 ntBASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 MTDHP3-201ENST00000594186 672 ntBASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 AC243591.1-201ENST00000452967 1364 ntBASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL3Q8IVW4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms